Tissierella sp. MB52-C2: RBU61_13200 Help Entry RBU61_13200       CDS       T09678                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism tiz  Tissierella sp. MB52-C2 Pathway tiz03030   DNA replication tiz03410   Base excision repair tiz03420   Nucleotide excision repair tiz03430   Mismatch repair Brite KEGG Orthology (KO) [BR:tiz00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     RBU61_13200 (ligA)    03410 Base excision repair     RBU61_13200 (ligA)    03420 Nucleotide excision repair     RBU61_13200 (ligA)    03430 Mismatch repair     RBU61_13200 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tiz03032]     RBU61_13200 (ligA)    03400 DNA repair and recombination proteins [BR:tiz03400]     RBU61_13200 (ligA) Enzymes [BR:tiz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      RBU61_13200 (ligA) DNA replication proteins [BR:tiz03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      RBU61_13200 (ligA) DNA repair and recombination proteins [BR:tiz03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      RBU61_13200 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      RBU61_13200 (ligA)    MMR (mismatch excision repair)     DNA ligase      RBU61_13200 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       RBU61_13200 (ligA) BRITE hierarchy Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 PTCB-BRCT HHH BRCT_2 DNA_ligase_ZBD 5_3_exonuc Motif Other DBs NCBI-ProteinID:  WMM23873 UniProt:  A0AA51MWI1 LinkDB All DBs Position complement(2606850..2608841) Genome browser AA seq 663 aa AA seqDB search MNEEKRIDELIEIINDLNYHYYTLDEPKLTDKEYDLLYDELVHLENTTGIIYSYSPTQRV GGELVDKFEKHTHLGRLWSLDKSQSVEELISWDNRVRKLIGDYNRENTDKLPEPKYIVEY KFDGLTINLTYRDGLLVEGATRGNGTVGEAILPQLKTIKSIPLKIDFKGTMEVHGEGLMP LSALEEYNRTASEPLKNARNAAAGALRNLDSRVTAERNLTAYFYNISYIEGKAFQRHVEI LEFLKENRFPVFPYAKEFDSINGVIEEIEIIREERHNIDLLTDGLVIKIDDIRTREVLGF TNRFPRWAIAYKFEAEETSTKLLEVVWNVGRTSKVTPTALLEPVDIGGVTVRRATLNNYD DILRKGVKLNSRVLIRRSNDVIPEILGTLETDEETFEIEKPTHCPACDSELIQNGVHIFC PNSLSCKPQLVSRLVHFASRDAMNIEGFSEKTAEKLLDELNIVDLPEIYEVKYEDLIKLE GFKEKKTNNLLEAIEKSKHIDLGSFIYALGINNVGIKTANDLANHFKSLDNLKNASHEEL ITVGEVGEIIANSILEFFHDDRILESLDKLLSEGVNPYFEEVEIEESIFTDKTVVITGTI EGLGRNEIKDMVEKMGGKVTGSVSKKTDYVIVGEDPGSKYDKAVELGIQIVRVSNGEFIV QNQ NT seq 1992 nt NT seq  +upstreamnt  +downstreamnt atgaatgaagaaaaaagaatagatgaacttattgaaataatcaatgatttaaattatcat tactatacattagacgaacctaaattaaccgacaaagaatatgatttattatatgatgag ttagtacatttagaaaatactacaggaataatttattcctactctccaacacaaagggta ggtggagaactagtagataagtttgaaaaacatactcatttaggtaggctatggagttta gataagagtcaaagtgtagaagaattaattagctgggataatagagttagaaaactaata ggagactataatagggaaaatacagataaattaccagagcctaaatatatagttgaatat aaatttgatggactgactataaatcttacctatagagatgggctattagtagaaggggca acaagaggaaatggaactgtaggtgaagcaattttacctcaacttaaaacaataaaatct attcctctaaaaattgattttaaggggactatggaggtacatggagaaggattaatgcca ttatcagcattagaagagtataataggacagcctctgaacctctaaaaaatgctagaaat gcagcagcaggagctttaaggaacttagattcaagggttacagcagaaagaaatcttaca gcttatttttataatatctcatatatagaaggaaaagccttccaaaggcatgtggagata ttggaattcctaaaagaaaatagattccctgtatttccatatgctaaagaatttgattcc ataaatggagtaattgaagaaatagaaatcataagggaagaaagacacaatatagatctc ttaacagatggattagttataaaaatagatgatataagaactagagaagtcttaggattt actaataggtttcctagatgggcaatagcctataaatttgaagcggaagaaacatcaact aaacttttagaagtagtatggaacgtaggtagaacatctaaagtaacacctactgcctta cttgagccagtggatattggtggagttacagttagaagagccacattaaataactatgat gatattctacgaaaaggtgttaagttaaattcaagggttcttattagaagatctaacgat gttattccagaaatattgggaactttagagacggatgaggaaacttttgaaatagaaaag ccaacccattgtccagcttgtgattctgaattaattcaaaatggagttcatatattttgt ccaaactcactttcctgtaagccgcagctagtatctagactagtccattttgccagtcgt gatgctatgaatatagaaggatttagtgaaaaaactgcagaaaagctattggatgaatta aacatagtggatttacctgagatatatgaagtaaaatatgaagatttaattaaattagaa ggatttaaggaaaagaaaacaaataatttattagaggcaatagaaaaatcaaaacatata gatttaggttcttttatatatgctttagggataaataatgttggaataaagacagcaaac gatttagcaaaccattttaaatctttagataaccttaaaaatgcaagccatgaagaatta ataacagtaggagaagttggagaaatcattgccaacagtatattggagtttttccatgat gataggatactggaaagtctcgataaactattgtctgaaggagtaaatccatattttgaa gaagtagaaatagaagaatctatatttacagacaaaacagtagttattacagggactata gagggattaggcagaaacgagataaaggatatggtagaaaaaatgggtggtaaagtaaca ggctccgttagtaaaaaaactgactatgtaatagtaggagaagatccagggtctaagtat gataaagctgtagaattgggaattcaaatagttagagttagtaatggagagtttatagtt caaaaccaataa

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