Tenacibaculum jejuense: TJEJU_2767
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Entry
TJEJU_2767 CDS
T05041
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tje
Tenacibaculum jejuense
Pathway
tje03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TJEJU_2767 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tje03400
]
TJEJU_2767 (nth)
Enzymes [BR:
tje01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TJEJU_2767 (nth)
DNA repair and recombination proteins [BR:
tje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TJEJU_2767 (nth)
Prokaryotic type
TJEJU_2767 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
SNR16445
UniProt:
A0A238UBK1
LinkDB
All DBs
Position
TJEJU:3062386..3063045
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AA seq
219 aa
AA seq
DB search
MNKTEKVQFVIDTLERLYPETPIPLDHTDPYTLLIAVLMSAQSTDERVNKITPLLFERAD
NPYDMIQLSVDEIREIIKPVGLSPMKSKGIYGLSQILIEKHNGEVPKSFEALEALPAVGH
KTASVVMAQAFNIPAFPVDTHIHRLMYRWNLSNGKSIAQTEKDAKRLFPKEIWNKLHLQI
IFYGREYCPARGWNLDNDIITSAIGRKTVITEYNKKKKK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaaaaagttcagtttgtaattgatactttagagcgattatatccagaa
actcctattcctttagatcatacagatccttatacattattaatcgccgttttaatgtct
gctcagagtactgacgaacgtgtaaataagattacacctttactctttgagcgtgcagat
aatccttatgatatgatacaattatctgttgatgaaatcagggaaattataaaacctgtt
ggactttcccccatgaaatcgaaaggaatttatggtttgtctcaaattttaatagaaaaa
cataatggagaagttccgaaaagttttgaagccttagaagcactaccggcggtcggacat
aaaacagctagtgtagtgatggctcaagcatttaacatccctgcattccctgttgataca
catattcatcgtttaatgtatcgttggaatttatctaacggaaaaagtattgcacaaaca
gaaaaggacgcaaaacgtttatttcctaaagaaatttggaataaactacatttacaaatt
attttttatggtagagagtattgtcctgcaagaggttggaatttagataatgatataatt
actagtgcaattggaagaaaaactgtaattacagaatacaacaaaaagaagaaaaaataa
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