KEGG   Thermococcus kodakarensis: TK1116
Entry
TK1116            CDS       T00226                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase
  KO
K03212  23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
Organism
tko  Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:tko00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tko03009]
    TK1116
Enzymes [BR:tko01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     TK1116
Ribosome biogenesis [BR:tko03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    TK1116
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRM5-TYW2_MTfase MTS Methyltransf_25 Methyltransf_31 PrmA Cons_hypoth95 Methyltransf_15 Methyltransf_11 PabTrmU54_TRAM_dom Methyltransf_23 Methyltransf_12 N6_N4_Mtase UPF0020
Other DBs
NCBI-ProteinID: BAD85305
UniProt: Q5JE68
LinkDB
Position
979780..981045
AA seq 421 aa
MKIQGKIWDLSEDGLGILRREEKPLYVPFAYPYDFVKARRVKRRFGRRIVTDFELLDPSP
LRQRPRCRHFGFCGGCLWQGLKYKEQLRLKVELFEKITGISADIKGSPKVWGFRNVSNFI
VSTTGIGLKKYGNPFDVEDLFECPVFSEKTLDYLRALRSFLAETGLKPWDLKRKTGDVHY
LQVREGKFTREIMVNLISHSPPSPNTTEAFLGYFSFADSLYWSVKTDKRDDPRGEPQLIG
GSPYIHERIGEVTYLIHPNSFFQTNSYALPLLIKAVENFASGEMILDLYAGVGTFGVWLA
KRRFQVEGIELNPFAVEIANKNAEINNVDATFKVGRAEETPIGKYDTVVVDPPRKGLKEV
AETLARSEIGKVVYVSCNPKAFKLDYENHLKKAYTIEDAVLIDMFPHTPHVEAVISLKRK
H
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaagattcaaggaaagatttgggacttaagcgaggatgggctgggcatactgaggcgg
gaagagaaacccctctacgttccatttgcatatccttatgattttgtaaaggccagaaga
gtaaaacgccgctttggaaggagaattgttacggattttgaactcctcgatccttcccca
ctccgccagcgcccgaggtgcagacacttcggattctgcgggggatgcctctggcagggg
ttgaagtacaaggagcagttgcggctcaaagtcgagctttttgaaaagatcactgggata
agtgccgatataaagggctctccaaaagtttggggcttcagaaacgttagcaacttcatc
gtttcaacgacaggcattggacttaaaaagtatggaaatcctttcgacgtggaagatctc
tttgagtgtcccgttttctcagaaaaaacgctagattatctacgtgctctgagaagcttt
ctcgccgagactggcttgaagccctgggatttgaagagaaaaactggagacgttcactac
ctccaggtgagggaggggaagttcacgagagagataatggtaaacttgatatcccactcc
cctccttcccccaacacgacggaggcgttcttaggatacttctcattcgcagattctcta
tactggagcgtcaagaccgataagagagacgacccaaggggtgagccccaactaatcggc
ggatcgccttacatccacgagagaattggggaagtcacgtaccttattcatcccaacagc
ttcttccagaccaacagctatgcccttccgcttctcattaaggccgtcgagaattttgcc
tccggggagatgattttagacctgtacgctggagttgggacgtttggagtgtggctggca
aagagaagattccaggttgaaggcattgaactcaacccgttcgccgttgagatagccaat
aagaacgccgagattaacaatgttgatgcaaccttcaaagttgggagggcggaggagacc
ccgatagggaagtacgacacggtggtcgttgatcccccgagaaaggggctaaaggaggta
gcggaaaccctcgcgagaagtgagataggaaaagtcgtctacgtctcctgcaacccgaag
gccttcaagctagactatgagaaccacctgaagaaggcatacaccatagaggatgcagta
ttaatagatatgtttccccacacgccgcacgttgaagccgtgataagcttaaaaaggaag
cattaa

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