Thioclava litoralis: RPE78_00200
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Entry
RPE78_00200 CDS
T10820
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tlb Thioclava litoralis
Pathway
tlb01501
beta-Lactam resistance
tlb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RPE78_00200
01503 Cationic antimicrobial peptide (CAMP) resistance
RPE78_00200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tlb03036
]
RPE78_00200
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlb02000
]
RPE78_00200
01504 Antimicrobial resistance genes [BR:
tlb01504
]
RPE78_00200
Chromosome and associated proteins [BR:
tlb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RPE78_00200
Transporters [BR:
tlb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RPE78_00200
Antimicrobial resistance genes [BR:
tlb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RPE78_00200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
OEP
SesA
STX6_10_61_N
Motif
Other DBs
NCBI-ProteinID:
WRY33750
LinkDB
All DBs
Position
36697..37932
Genome browser
AA seq
411 aa
AA seq
DB search
MPNVISSPTFSMTALALVLGLVCAPSAVLVSAVPAAAQAAPAQGPQKVGVITVAESDVPF
VVTLPGRAVAYEQADIRPRVEGVITSIPYQRGAFVPKGTVLFTIEPDTYEAEFAAAEASV
ASAQAAVETAQSTYDRYNRIRDVGVTQTTLEDSASTLASAKATLKSAQASLQTAQLNLDR
TSIESPIDGIVEVPETSIGTLVTANQTDALTTVTRLDPIYVDVSESSAQMQRTRDLVEAG
ILKLNSDVQTTVTLETGEPYPRDGKLITPSSVVSDTTGTIDYRVQFDNPDAKILPGQFLR
VTMTLGTSKAILIPQNATSRASDGTLTAYIVGDTSTAEQVTLTTHGSYQNQWIVTNGLKD
GDKLVVDGLMKLQNGAEVSTVAVTIDKEGVVQETPTTETPAESAASGAASE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgtcatttcttcccccaccttttcgatgaccgcactcgctcttgtgctcggg
cttgtctgcgccccctccgcagtgctggtctcggcggtccccgctgcggcacaggccgcc
cccgcacaaggcccccagaaggtcggcgtgatcaccgtcgccgaaagcgacgtgcctttc
gtcgtcaccctgccggggcgcgccgtggcctatgagcaggccgatatccgcccgcgcgtc
gagggggtgatcacctcgatcccctatcagcgcggcgcgttcgtccccaagggcaccgtc
ctttttaccatcgaaccagatacttacgaggcagaatttgccgcagccgaagcctctgtc
gcatccgcacaggccgctgtcgaaacggcacaatccacctatgaccgttataaccgcatc
cgcgatgtcggggtgacgcagaccacgctggaagattccgcctcgacgctggcttcggcc
aaggccacgctgaaatcggcacaggccagcctgcagacggcgcagctcaatctggaccgc
acctcgatcgaaagtccgattgacggcatcgtagaggtgcccgaaacctcgatcggcacc
ttggtcaccgccaaccagacagatgcgctgaccaccgtcacgcggctggatccgatctat
gtggatgtgtccgaaagctcggcccagatgcagcgcacgcgggatctggtcgaggcgggc
atcctgaagctgaattccgacgtgcagacgacggtcacgctggagaccggcgaaccctat
ccccgtgacggcaagctgatcaccccgtcttcggtggtgtccgacacaaccggcaccatt
gattaccgtgtgcaattcgacaatcccgatgccaagatcctgcccggccagttcctgcgc
gtgaccatgacgctgggcacctccaaggcgatcctgatcccgcaaaacgccacctcgcgc
gccagcgacggcacattgaccgcctatatcgtcggcgacacctccaccgcagagcaggtc
acgctgaccacgcatggctcctaccagaaccaatggatcgttaccaacgggctcaaggat
ggtgacaagctggtcgtggacgggctgatgaagctgcaaaacggcgccgaggtcagcacc
gttgctgtcaccatcgacaaggaaggcgtggtgcaggagacccctaccacagaaacaccg
gcagagagcgcagcctccggcgcggcaagcgagtaa
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