Thiothrix lacustris: RCF98_01495
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Entry
RCF98_01495 CDS
T09396
Symbol
acnD
Name
(GenBank) Fe/S-dependent 2-methylisocitrate dehydratase AcnD
KO
K20455
2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:
4.2.1.117
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00640
Propanoate metabolism
tlc01100
Metabolic pathways
tlc01120
Microbial metabolism in diverse environments
tlc01200
Carbon metabolism
Module
tlc_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RCF98_01495 (acnD)
Enzymes [BR:
tlc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.117 2-methylcitrate dehydratase (2-methyl-trans-aconitate-forming)
RCF98_01495 (acnD)
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
WML91040
LinkDB
All DBs
Position
330654..333257
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AA seq
867 aa
AA seq
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MNTEYRKNLPGTKLDYFDTRAAIEAIQPGSYATLPYTSRVLAEQLVRRCEPEMLTDSLKQ
LIEGKQDLDFPWYPARVVCHDILGQTALVDLAGLRDAIADQGGDPAKVNPVVPTQLIVDH
SLAVECGGFDPDAFAKNRAIEDRRNEDRFHFIEWTKTAFKNVDVIPAGNGIMHQINLEKM
SPVIQARDGVAFPDTCVGTDSHTPHVDALGVIAIGVGGLEAETVMLGLPSMMRLPDIIGV
KLVGKRQPGITATDIVLAITEFLRKERVVSAWLEFFGEGAKNLTIGDRATISNMTPEFGA
SAGMFYIDEQTIDYLKLTGREPEQVALVENYAKATGLWADSLVDATYPRVLEFDLSSVVR
NMAGPSNPHRRLPTADLAERGIAVNLAAAQAEEAEGKMPDGAVIIAAITSCTNTSNPRNV
VAAALLARNANKLGLVRKPWVKTSFAPGSKVAELYLQEAGLLTELEQLGFGIVGFACTTC
NGMSGALDPAIQQEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAIAGTI
RFDIEKDVLGTDKDGNPITLKDIWPTDEEIDAIVAASVKPEQFKQIYIPMFDLGTVEEAK
SPLYDWRPMSTYIRRPPYWEGALAGERTLKGMLPLAVLPDNITTDHLSPSNAIMMNSAAG
EYLHKMGLPEEDFNSYATHRGDHLTAQRATFANPKLINEMAVVDGKVKQGSLARVEPEGQ
VMRMWEAIETYMERKQPLIIVAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNL
VGMGVLPLEFKAGETRKTYAIDGTESYDVEGDIAPRADLTVIMHRRNGETVRIPVTCRLD
TAAEVRVYNAGGVLQRFAQDFLEGDAA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgaataccgtaaaaacctgcccggcaccaaactggactacttcgacacccgc
gcggcgatcgaagccatccaacccggcagctacgccaccctgccctacacctcgcgtgta
ttggcagaacaactggtacgccgttgcgaacccgagatgctgaccgactcattgaagcag
ctcatcgaaggcaagcaggatctggacttcccgtggtatcccgcccgcgtggtctgccat
gacatcctcggccaaaccgcactggttgaccttgctggcctgcgtgacgcgattgctgac
caaggcggcgacccagcgaaagttaacccggtcgtgcctacccagttgatcgttgaccac
tcactggccgttgaatgcggtggcttcgacccggatgcattcgcgaaaaaccgcgccatt
gaagaccgtcgtaacgaagaccgtttccacttcatcgagtggacaaaaaccgcgttcaaa
aacgtcgacgtgatcccagcaggcaacggcatcatgcaccagatcaatctggagaaaatg
tcgccggtgattcaagcgcgtgacggcgtagccttccctgacacctgcgtcggcacagac
tcacacaccccacacgttgacgcactcggcgttatcgcgattggcgtcggtggcctggaa
gccgaaaccgtcatgctgggcttgccttccatgatgcgtctgccggacattatcggcgtg
aaactggtcggcaaacgccaacccggcatcactgccaccgacatcgtactggccatcacc
gaattcctgcgtaaagagcgtgtagtctctgcatggctggaattcttcggcgaaggggcg
aaaaacctcaccatcggcgaccgtgcgaccatttccaatatgaccccggaattcggcgcg
tcggcgggcatgttctacatcgacgaacaaaccattgactacctgaagctgaccgggcgt
gaaccggagcaagtcgcgctggttgaaaactacgctaaagccaccggcttgtgggcggat
tcactggtagacgcaacatacccgcgtgtactggaattcgacctgtccagcgtggtgcgt
aacatggctggcccttccaacccacaccgccgtttaccgacggctgacttggctgagcgc
ggcattgcggtgaatttggcagcggcgcaagccgaagaagcggaaggcaaaatgccagac
ggcgcggtcatcatcgcggcgatcacctcttgcaccaacacctccaatccacgcaacgtg
gtggccgctgccttgctggcacgcaacgccaacaaactgggcttggtacgcaaaccgtgg
gtgaaaacctcgttcgctccgggttccaaagtcgccgagctgtatctgcaagaagccggt
ttgctgacggaactggaacaactcggtttcggcatcgtcggtttcgcttgcaccacctgt
aacggcatgtctggcgcactcgaccccgccatccagcaagaaatcatcgaccgcgacttg
tatgcgaccgctgtcctgtccggcaaccgtaacttcgacgggcgtattcacccgtatgcc
aagcaagcgttccttgcgtccccgccgctggtagtcgcttacgcgattgcaggcacgatc
cgtttcgacatcgaaaaagacgtgctgggtacggacaaagatggcaaccccatcacgctg
aaagacatctggcctactgacgaagaaatcgacgccatcgttgccgccagcgttaagcct
gagcagttcaagcaaatctacatcccgatgtttgatctgggtacggtagaagaagcgaaa
agcccgttgtatgactggcgtcccatgtccacctacatccgccgccccccttactgggaa
ggtgcattggcaggtgaacgcaccttgaaagggatgctgccgttagcggtattgccagac
aatatcaccactgaccacttatcgccttccaacgcgatcatgatgaacagtgcggcgggc
gaatacctgcacaaaatgggcttgccggaagaagacttcaactcttacgcgactcaccgt
ggtgaccatttgaccgcgcaacgtgcgactttcgccaaccctaagctgatcaatgaaatg
gcagtggtggatggtaaagtcaagcaaggttccctcgctcgtgtcgagccagaaggccaa
gtcatgcgcatgtgggaagccatcgaaacctacatggaacgcaagcaaccgctgatcatc
gtcgcgggtgcagattatggccaaggttccagccgtgactgggcagccaaaggcgtgcgt
ctggctggcgtggaagcgattgtggcagaaggcttcgagcgcattcaccgtaccaacttg
gtcggcatgggcgtgctgccgctggaattcaaagcgggcgaaacgcgcaagacttatgct
atcgacggcaccgaaagctacgacgtggaaggtgacattgccccacgcgccgacctgacg
gtcatcatgcaccgcagaaacggcgaaaccgtgcgcattcctgtgacctgccgtctggat
accgctgcggaagtgcgtgtctataacgccggtggtgtgttgcaacgtttcgcgcaagac
ttcctcgaaggagacgcagcgtaa
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