Thiothrix lacustris: RCF98_12895
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Entry
RCF98_12895 CDS
T09396
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00300
Lysine biosynthesis
tlc00550
Peptidoglycan biosynthesis
tlc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RCF98_12895
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RCF98_12895
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
RCF98_12895
Enzymes [BR:
tlc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RCF98_12895
Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
Precursor biosynthesis
Amino acid ligase
RCF98_12895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Importin_rep_5
Motif
Other DBs
NCBI-ProteinID:
WML89864
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Position
2623548..2625056
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AA seq
502 aa
AA seq
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MNRSLSLRTLLQGIVESVPDIQVNGLTLDNRHIQPGMAFVALRGTRQHGLSYAESAVQAG
AVVVLFEPEEGLQQPALSVDLVAVPSLQEHLGLLADRFNAAPSAELFMIGVTGTDGKTSV
SHFVAEALNAETLTGTHATAVIGTLGIGMPGALRPATHTTPDALTVHALLRDLRDTGFDA
VAMEVSSHALDQGRVNGIRFDVAVLTNLTRDHLDYHGTVEAYAEAKRKLFHWPDLKTVVL
NLDDAFGRRLAGELSAQSIHVIGYGVGKIEDYPAGTLVATAPVFDHVGIRAIVSGAKGEG
TLQAPVLGQFNLHNLLAALGVLLAKGLQWSDALQRLQHVWVVPGRMERVASTVRGEQPLV
VVDYAHTPGALQQVLKAVRVHTRGRLLCVFGCGGDRDRGKRPLMAKIAESDADVVIITDD
NPRSENPQQIFEDIMQGINNKVGVTVEHDRAQAIRLAIRQAQPGDTVLIAGKGHETVQIL
AHGTVPFDDRIQAAQALQECGV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgatcgctttccctgcgtaccctgttacagggtattgtcgagtctgtgcctgat
attcaggtgaatggcctgacgctggataatcgtcatattcagccgggcatggcctttgtt
gctttgcgtggcacacgtcaacatggcttgagttatgcagaatccgctgtacaggcaggg
gcggtcgtcgtgctgtttgagccagaagagggtttacaacagccagccttgtcggttgat
ttggtggccgtgccttccttgcaggagcatttaggtctgcttgctgaccgttttaatgct
gcccctagtgccgaattgttcatgataggggtaacgggcacggatggtaaaacctctgtc
agccattttgttgcagaagcgttgaatgcagaaaccctcacggggactcacgcaacggct
gtcatcggtacattgggtattggtatgccaggtgctttgcggcctgccacccataccacg
ccggatgcgctgactgttcatgccttattgcgtgacttacgggacacgggctttgatgcg
gtagcgatggaagtatcctcccatgcgttggatcagggtagggttaacggtatccgtttt
gatgtggcagtcttgaccaatttgacccgtgatcatctggattatcacggcactgtcgaa
gcctatgcagaggccaaacgtaagctgtttcattggcctgacctgaaaaccgtggtgcta
aacttggatgatgcgttcgggcggcgtttagcaggtgaattatccgctcagtctattcat
gtcatcggttacggtgttggtaagattgaggattaccctgcgggtacgttggtggccaca
gctccagtttttgatcatgtgggtattcgtgccattgtgagtggtgctaagggtgagggt
actctgcaagcgccggtgttagggcagtttaatttgcataatctactggctgccttaggc
gtgttattggcgaaaggcttgcaatggtcggatgctttgcagcgtttgcaacacgtttgg
gttgtgccggggcgtatggagcgggttgcatcgactgtgcgcggcgaacagccgttagtg
gtggtggattatgcgcatacacccggtgcgttgcagcaagtgttgaaagcggtgcgggtg
catacacgggggcgattactgtgtgttttcggttgcggtggtgaccgcgatagggggaaa
cgtcccctcatggcaaaaatagcagaatctgatgctgacgtagtgatcataaccgacgat
aatccgcgctcggaaaatccgcagcagatatttgaggacattatgcaaggcatcaataat
aaagtgggcgtgacagtagagcatgaccgtgcacaagcgattcgcttagctattcggcag
gcacaacccggtgatacggtattaattgccggtaagggacacgaaaccgtacaaatttta
gcacacggtactgtgccgtttgatgatcgcattcaggcagcgcaagccttgcaggagtgt
ggtgtatga
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