Thiothrix lacustris: RCF98_14445
Help
Entry
RCF98_14445 CDS
T09396
Name
(GenBank) response regulator transcription factor
KO
K07660
two-component system, OmpR family, response regulator PhoP
Organism
tlc
Thiothrix lacustris
Pathway
tlc01503
Cationic antimicrobial peptide (CAMP) resistance
tlc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RCF98_14445
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RCF98_14445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tlc02022
]
RCF98_14445
01504 Antimicrobial resistance genes [BR:
tlc01504
]
RCF98_14445
Two-component system [BR:
tlc02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
RCF98_14445
Antimicrobial resistance genes [BR:
tlc01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
RCF98_14445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
WML90160
LinkDB
All DBs
Position
complement(2955547..2956248)
Genome browser
AA seq
233 aa
AA seq
DB search
MRVLIIEDQDIIREQVAEDLKKSGFTVDLAADGSQGLYVALEYPIDVAVIDLGLPNSKGG
QVNNDLGLDIIRAIRAKGLDYPIIILTARDRWQSKVEGLEAGADDYVTKPFHTEELIARL
RVQLRRTGRWTQAELSCGPIRLNTSEQRVYVNEQEVTLTAYEYRVLEHLMLHAGEVISKT
RLTDSLYEEDTDRDSNVIEVFIRRLRIKLDPNDTLKPIETLRGRGYRFTLTRT
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtacttataatagaagaccaagatatcatccgcgaacaggttgctgaagacctt
aaaaaaagtggctttaccgtagatctcgccgccgatggctcacaggggctatatgttgca
ctggaatatcctattgacgtggccgtcatcgatttaggcctacccaattctaaaggtggg
caggttaataacgatttgggtttggatattatccgcgccatccgagctaaagggctggat
tacccgattattattctgaccgctcgcgatcgctggcaaagcaaagtcgaaggactcgaa
gcgggtgctgacgactatgtaaccaaaccattccataccgaagaactcatcgcccgtttg
cgcgtacaattacgccgtactggacgctggactcaagccgaactcagttgcggtcctatc
cgcttaaatacctcagaacagcgtgtctatgtcaatgaacaagaagtcacattgactgct
tatgaataccgcgtacttgagcacctgatgttacatgctggtgaagtcatttcaaaaaca
cgcctgactgacagcctgtatgaagaagatactgatcgtgatagcaatgtcattgaagta
tttattcgtcggttgcgcattaaactcgatccaaatgacacactcaaaccgattgagacg
ttacgtggtcgtggctaccgcttcacactcacgcgcacttaa
DBGET
integrated database retrieval system
