Thiothrix lacustris: RCF98_15125
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Entry
RCF98_15125 CDS
T09396
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tlc
Thiothrix lacustris
Pathway
tlc01501
beta-Lactam resistance
tlc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RCF98_15125
01503 Cationic antimicrobial peptide (CAMP) resistance
RCF98_15125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tlc03036
]
RCF98_15125
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlc02000
]
RCF98_15125
01504 Antimicrobial resistance genes [BR:
tlc01504
]
RCF98_15125
Chromosome and associated proteins [BR:
tlc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RCF98_15125
Transporters [BR:
tlc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RCF98_15125
Antimicrobial resistance genes [BR:
tlc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RCF98_15125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YknX_C
BSH_RND
RND-MFP_C
BSH_CzcB
CzcB_C
Biotin_lipoyl
HH_YBHG
Beta-barrel_RND_2
BSH_CusB
HH_EMRA
BSH_Fcp1
Rod_CreS
BSH_YknX
HH_MFP_RND
HH_AAEA_pHBA
Nuc_deoxyri_tr2
Motif
Other DBs
NCBI-ProteinID:
WML90289
UniProt:
A0ABY9MNQ7
LinkDB
All DBs
Position
complement(3098721..3099866)
Genome browser
AA seq
381 aa
AA seq
DB search
MKNHSSLASRFVQTLLLATSLTTLSAITHAEDAPPAATNAALAVTITNPSAADWNSGITA
SGTLSPWQEAIVASEIGGQRIAKLLVDIGDKVKQGQTLAILAPEAVQADVAQATARVTQA
EASLDEAKTNAGRARTLKSSGALPAQQIDQYLTGEATAKANLAAQKAALQAQQIRLEQTR
ITAPDNGIVSSRSATLGAVVQTGTELFRLVRQNKIEWRAEVAGRDVASIQTGQSANLTLP
TGESVSGIVRVVSPTLDANTRNATVYISLPSDSPAKAGMFAEGQILTGSSKAMGLPQSAV
ILRDGNRYVFEVNADNHVLQRLVKTGRQADGKVEILEGITPAARVVATGGAFLNDGDTVQ
IIDKAPETAPNNASNRDKPKP
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcattcctcgcttgcatcccgtttcgtacaaaccttgttactggcaactagc
ctaacaacccttagtgccattacccacgcggaagatgcaccacccgccgccaccaatgca
gcacttgcagtcactatcaccaaccccagcgcagccgattggaacagcggcattactgcc
agcggtacactcagcccatggcaagaagcgattgtcgcctccgaaatcggcgggcaacgc
atcgccaaactgttggtcgacatcggcgataaggtcaaacaaggccagacgctcgccatc
ctcgcccccgaagcagtgcaagccgacgttgcccaagccactgcccgtgtcactcaagcc
gaagccagccttgatgaagccaaaaccaatgcaggacgcgcccgcaccctgaaatcttct
ggtgcgctccctgcccaacaaattgaccaatacctgacaggcgaagcaaccgcaaaagcc
aaccttgccgcccaaaaagctgccttgcaagcccagcaaattcgcctagagcaaacccgc
atcaccgcacccgacaatggcattgtgtcttcccgcagtgccactcttggtgcggtcgta
caaacgggcacagaactcttccggctagtccgccaaaacaagatcgaatggcgggcagaa
gtcgcagggcgtgatgttgccagcattcagaccgggcaatccgccaacctgaccctgccc
accggcgaaagcgtcagcggaatcgtccgcgtagtttcccccacactcgacgccaacacc
cgtaacgccacggtttacatcagcctgcccagcgacagccccgccaaagcaggcatgttt
gcggaaggccaaattctcaccggttccagcaaagccatggggctgccacaatcggcggtt
atcctgcgtgatggcaaccgttacgtgtttgaagtcaacgcggataaccatgtgctccaa
cgcctcgtcaaaaccgggcgacaggctgacggcaaagttgaaatcctcgaaggcattacc
ccggctgcacgggtagtcgccaccggtggcgcattcctcaatgacggtgacaccgtacaa
atcatcgacaaagcgcccgaaactgcccccaataacgccagtaaccgggataagccaaaa
ccatga
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