Thiomicrorhabdus lithotrophica: NR989_00480
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Entry
NR989_00480 CDS
T09486
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh01501
beta-Lactam resistance
tlh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NR989_00480
01503 Cationic antimicrobial peptide (CAMP) resistance
NR989_00480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlh02000
]
NR989_00480
01504 Antimicrobial resistance genes [BR:
tlh01504
]
NR989_00480
Transporters [BR:
tlh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NR989_00480
Antimicrobial resistance genes [BR:
tlh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NR989_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Sterol-sensing
Patched
NRIP1_repr_2
Motif
Other DBs
NCBI-ProteinID:
WEJ62753
UniProt:
A0ABY8C9V1
LinkDB
All DBs
Position
complement(115654..118758)
Genome browser
AA seq
1034 aa
AA seq
DB search
MWLSDTSVKRPILATVASLLLLAFGLMAFDRMSLREYPNVDAPIVTIDTKYLGASAKVVE
NRITKLIENRISGVSGIQYIESTSSDGRSNIKVEFSIERDIDDAANDIRDRVARIADNLP
EQATAPEVEKVDGDESVIMWFNLVSDQMTVPQLTDYAERYLVDRFSVLDGVARVRVGGGQ
SYALRIWLNPQKMALYGVTTSDIEAQLRAANAELPIGALQGEHILFTLQADKPLSSIKEL
QNLIIKQNQQIGQLTLKDVAEVKLGAIERRRLFRGNGIPMVGIGIIKQSTANTLTVANLA
RDRKEIVNKSLPAGLEIKDSYDSSVFVQQAVNEVYKTLFIALGLVSLVMLAFLKSWRMAL
VPMVTLPVSLIATFGILWTLGFSINLLTLLALVLAIGLVVDDAIVVLENTQRHIDMGHKP
IAAAYLGTRQVGFAVIATTLTLIAVFLPIAFLEGQVGRLFSEFAITLAVAVLFSSWVALT
LSPALASNLLKARKPKTENFIEGQASARRPAPSHLFKKLLVKNLRYAWVSLLIFISVIGA
GVYFSSEVPKEYVPKEDRGAFFVVVKGPEGATYEYMQSYMNEIEERLMPLVDNGEAKRLL
IRAPRSFSSTEIFNTGFVIIVLEDWAHRRSAYTIMNEIRGKLSDLTGVKAFPVMRSPIGG
RIQKPVQFVIGGSSYEQLEQWQQMMNQAIQENNPGLVSVDWDYEPNKPQIDIKVDYDKAA
ALGISHQDVTETLQMLLGSKRVTTYQHEGEEIDIYLKADHKLFTSPKDFEQIYLRSATTD
QMVPLSSITKMTTSGEASSLNRYNRVRSMTLSAKLEDGYSLDQALTDLQTLTRATLPPEA
IIDYKGQSRDFQNSSNSFFFVFILGILVIYLVLAAQFESFIHPMVILLTVPMALAGGLFA
LLVFNMSLNIYSQIALVLLLGLATKNGILIVEFTNQLRDKGYSTYHALVSATKLRLRPIL
MTAVTTIAGTLPLIFSSGAGAETRYILGVVLFFGVAFSTLLSLFIIPSAYALIAKNSGSP
LASTHKLEKALQDN
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtggctatctgatacgtctgtaaaacgcccaattttagctacggttgcctctttactg
cttttagcctttggccttatggcctttgatcgcatgagtttacgcgagtatccgaatgtg
gatgcacccattgtcactatagacactaaataccttggcgcttcagcaaaggtcgtagaa
aaccgtattacaaaactcatcgaaaaccgtatttctggggtgtcagggattcagtatatt
gaatccacctcaagtgacggacgttctaatattaaagtggaattttcaatcgaacgcgat
atcgacgatgccgctaatgatatccgtgaccgagtcgctcgtattgctgataatttaccc
gaacaagctacggcacccgaagtagaaaaggtagatggcgatgaaagcgtcattatgtgg
ttcaacttagtcagtgaccaaatgacggttccacaactgaccgattatgcagaacgttac
ttggttgaccgtttttctgtcttggatggtgttgcacgtgtgcgcgttgggggtgggcaa
tcttatgctttacgtatttggttaaacccacaaaaaatggcgctctatggtgtcacaacc
agtgatattgaagcacagcttagagccgctaatgccgaactaccgattggagccctgcaa
ggcgaacatatcttgtttaccctgcaagccgataagcctttaagcagtataaaagaacta
caaaacctcattatcaaacaaaaccaacagataggccaacttactttaaaagatgtggct
gaggtgaaattaggcgcaattgaacgtcgtcgcctatttcgtggtaatggtattccaatg
gtgggtattggtattatcaaacagtctaccgccaataccttaacggtggcgaacttagct
cgtgacagaaaagagatagtcaataaatctctacccgcaggactcgaaatcaaagacagt
tacgactcgtccgtgtttgtgcaacaagcggtaaatgaggtgtataaaaccttatttatt
gccttaggcttggtctctttagtcatgctggctttcttaaaaagctggcgcatggcgctt
gtgccaatggtcaccctgcctgtttctctgattgccacctttggtattttatggacgctc
ggtttttcgattaacctattaaccttactggccttagtgctcgctattggcttggtggtg
gatgatgcgattgtcgtattagaaaacacccagcgccatatcgatatgggacacaaaccg
attgctgctgcttacctaggcactcgtcaagtcggttttgccgttattgctaccacctta
accctaattgcggtgtttttacctatcgcctttttagaaggccaagttggacgcttattc
tcagaatttgctatcaccttagccgtcgccgttttgttctcaagctgggttgctttaact
ctctcacccgctttggcttcaaaccttttaaaagcgcgaaaacctaaaacggaaaacttt
attgagggtcaggcttctgctagacggcctgcgccgtcacatttatttaagaagctattg
gttaagaacttacgttatgcttgggtgagtcttttgatttttattagtgtcattggtgca
ggtgtttatttctcttctgaagtgcctaaagaatacgtgccaaaagaagatagaggtgcc
ttttttgttgttgtcaaagggcctgaaggcgcaacctatgaatacatgcaaagttacatg
aatgaaattgaagaacgtttaatgccactggtagacaacggtgaagctaaacgcttactg
attcgtgcaccaagatcctttagctctactgaaatttttaatactggttttgttattatc
gtgctcgaagactgggcgcatcgacgctccgcctataccattatgaacgaaattcgcggc
aaactgtctgatctaactggcgtaaaagccttccctgttatgcgttcaccgattggtggt
cgcattcaaaaacctgtgcaatttgttatcggtggttcaagttacgaacaactcgagcag
tggcaacaaatgatgaaccaagccatacaagaaaataacccaggcctggtaagtgtggat
tgggattatgaacctaataaaccacaaattgatatcaaggtggactatgacaaagcagcc
gctttaggaatctcacatcaagacgttaccgaaacactgcaaatgttgttaggtagtaag
cgtgtcacaacctaccaacatgaaggtgaagaaattgatatctatctaaaagccgaccac
aaattgtttacctcgccaaaagattttgaacaaatttatctgcgttcagccaccaccgat
caaatggtgccattatcgtccataaccaagatgaccacttctggtgaagcctcaagctta
aaccgatacaacagagtgcgttcaatgaccttgtcggccaaactagaagatggttattca
cttgatcaagcattaaccgatttacaaacgctaacgcgtgccactttgccaccagaagcc
attattgactacaaaggccaatcaagagacttccaaaacagctctaattctttcttcttt
gtatttattttgggtattttagttatctatctagtgttagccgcacagtttgagagcttt
attcaccctatggtgattttactgaccgtgccaatggcattggcgggcggcctgtttgcg
ctcctggtgtttaatatgagtctcaacatatatagtcaaatcgcactggtcttactactc
ggtttagccactaaaaacgggattttaattgttgaatttaccaaccaactgcgcgataaa
ggttacagcacctatcatgcattggtgtcagcgactaaattgcgcttaagacccattttg
atgacagctgttactaccattgcgggtactctaccgcttatattctcaagtggtgcaggg
gcagaaactcgttatattctgggtgtggtactgttctttggtgttgctttttcaacgcta
ttaagcctattcattattcccagtgcttatgctttgattgcaaaaaatagcggttcacct
ttagcctcaacccataagttagaaaaagcattgcaagacaattaa
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