Thiomicrorhabdus lithotrophica: NR989_00485
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Entry
NR989_00485 CDS
T09486
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh01501
beta-Lactam resistance
tlh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NR989_00485
01503 Cationic antimicrobial peptide (CAMP) resistance
NR989_00485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tlh03036
]
NR989_00485
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlh02000
]
NR989_00485
01504 Antimicrobial resistance genes [BR:
tlh01504
]
NR989_00485
Chromosome and associated proteins [BR:
tlh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NR989_00485
Transporters [BR:
tlh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NR989_00485
Antimicrobial resistance genes [BR:
tlh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NR989_00485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
WEJ62754
LinkDB
All DBs
Position
complement(118761..119858)
Genome browser
AA seq
365 aa
AA seq
DB search
MRNSEFTFLSFLATFLLVSSTYAKPPVEVIAYQATIESKPQEIKSLGLLQAKQSIEIASN
ASDSIKAIYFNSGQMVTKGDLLLTLNDTEEQASLQEAMALEKETLAQYQRVKKAVSRNTV
TQSLVDEKYREWRTAIAKRKVMEATIADRKITAPFSGQLGFSSYAIGANLTEGSPIVSLD
DISEMKLDMSIPNRFLSYLQIGQTVTLNSEAYPNQTFEGKISAVSPRLQSYTRLLKVQAL
IPNPNGLLKTNMMVEAQIQLPNKKQLMIPNTALIMLGDKEFVYRLVAAKDNLYKAEKILV
ESGEIGSKNSEILSGLNQGDLVVSQGVMKVNARVPVKIKAIQNELSQEKLLKPSQASQPA
KTKNP
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaattctgaatttacttttttatcttttttagccacttttttgttggtcagtagc
acttacgctaaaccaccagtagaagtcattgcctaccaagctaccattgaatcaaaaccc
caggaaattaaatcactcggcttactgcaagctaaacaatccattgagattgcttccaat
gcctcagactcaataaaagccatttatttcaactctggacaaatggtaacaaagggcgat
ttattgctcactcttaacgacactgaagagcaagcttctttacaagaagctatggccctc
gaaaaagagaccctagctcagtatcaacgtgtcaaaaaagcggtaagtcgcaataccgtt
acacaatctttagtcgatgaaaagtaccgtgaatggcgaactgcaatcgctaaacgtaag
gttatggaagcgacgattgcggatcgtaaaatcacagcgccatttagcggtcaacttggt
ttttcctcttatgctataggggcaaacctgacagaaggcagccctattgtcagcctagat
gacattagcgaaatgaagcttgatatgtcgattccaaaccgttttttaagctaccttcaa
attggacaaacggttactctaaactcggaagcttatcctaatcagacttttgaaggcaaa
attagtgctgtctctccaaggttgcaatcctatacccgtttattaaaagttcaggcatta
atccctaatccaaacggtttactcaaaaccaatatgatggttgaagcccaaatacaatta
ccaaataaaaaacaacttatgattcctaatacggctttgatcatgctgggtgataaagag
tttgtttatcgtcttgtggctgccaaagataacctttataaagcggaaaaaattcttgta
gaaagtggtgaaattggttcaaagaacagtgaaattttatcgggtctaaatcaaggtgat
ttagtagtgagccaaggggtgatgaaagtaaatgctagagtacccgtgaaaattaaagcc
attcaaaatgaactctctcaagagaaactactaaaaccatcgcaagcttctcagcctgcc
aaaactaagaacccataa
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