Thiomicrorhabdus lithotrophica: NR989_02010
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Entry
NR989_02010 CDS
T09486
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh01501
beta-Lactam resistance
tlh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NR989_02010
01503 Cationic antimicrobial peptide (CAMP) resistance
NR989_02010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlh02000
]
NR989_02010
01504 Antimicrobial resistance genes [BR:
tlh01504
]
NR989_02010
Transporters [BR:
tlh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NR989_02010
Antimicrobial resistance genes [BR:
tlh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NR989_02010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
WEJ63046
LinkDB
All DBs
Position
complement(454768..457893)
Genome browser
AA seq
1041 aa
AA seq
DB search
MFSNYFINRPVLASVLSFVIIIAGYLAMKSLPVAEYPEIVPPQVAVTASYPGASAETISD
TVAAPLEQAINGIDDMLYINSVTSSSGTLTLTVTFKIGTDIDQANINVNNKVQGALSKLP
SEVQRAGVQVNKKSSSILKVIALYSDDSSLDTVFIANYGLINVLDELARIPGVGEARQFG
AKDYSMRVWLEPNKLAQYKLTPNDVYQAIQSQNSQFAAGRFGQEPMQNAQAFTYTVTTEG
RLSEPEQFENIILRAESDGNALRLKDVARIELGAQDYSFNATFDGKPTVPIGVFLKPGAN
ALETSDLIDSKLAELSNNFPNGLDYAVPYDTTEFVNISIEKVIYTLFEALILVVLVVFLF
LQNARATLIPVLAIPVSIIGTFVGMYLLGFSINQLTLFGMILAIGIVVDDAIIVVENVER
IMHSENLSAREATIKAMSEITGPIVAIVLVLGAVFIPVAFIEGLTGQMYRQFAITIVISV
TISGLVALTLTPALCANLLKPVQTKTSGFFYQFNRFFTATTNGFTLGVRTVMRYSLISVL
LFGGLVFITYQSLGGLPKGLLPQEDKGTLFVLNYLPPASSLARTEVVRDQTSEMLRQHAG
VDHAISFAGFDLQTFTNKTDSAVSFVSLKHWDERQEPNESSPAIVGQLFGQLMAIPDAFS
IPIGMPTIMGMSMTGGFEAYLQNRNGDGSLALSKTTDELIAKATARPELASVRTTFSTKV
PQYEVKLDREKAQAMQVPVNDVFSAMQATFGTLYVNDFNLYGRTYKVNLQSEANYREKPE
DLAQVFVRAQTGHMIPLSSLVSVKRLTGADVIDRFNLFPAAKLMGEPAPGYSSGQAIAAF
EEVANEVMPEGYSLGWVGEAYQEKQSSSSGNQAFLFGLLFVFLILAAQYERWSIPIAVLT
AVPFAVLGATLAVSLSGLQNDIYFQLGLLTLIGLSAKNAILIVEVGMQKHKQGMPLAEAA
ETAARLRFRPIVMTSLAFTIAAIPLMLSTGAGAAARQAVGTGLVGGMIAATLFAPLFIPM
FFRWVAAFSERFGSKKIQESK
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaactactttatcaaccgccctgttctagccagtgtcttgtcgtttgttatt
attattgctggttacttagcaatgaaatctttgcctgttgccgaatacccggaaattgtg
ccaccacaggtagcggtaaccgcaagttaccctggagcgagcgcagaaacaatctcagat
acagtagctgcccccttagaacaggcgattaacggcatagatgatatgctatacatcaac
tcggtgacttcctcttctggtaccttaacgctcactgttacctttaagattggtacggac
attgatcaagccaacatcaatgtaaacaataaagtgcaaggggctttaagcaaactacca
agcgaggtgcaacgtgcgggtgtacaggtcaataaaaaatcctcaagtattttaaaagtc
atcgctttgtattctgatgactcctctcttgatacggtattcattgccaactatggccta
attaacgttttagatgaattggctcgtattccaggtgtaggtgaagcgcgtcaatttggc
gccaaagattactcgatgcgtgtgtggctagaacctaataaactcgctcaatataagctt
acgccaaacgatgtttaccaagcaatacaatcgcaaaactcacaatttgctgcggggcgt
tttggtcaagagccaatgcaaaacgcgcaagcgtttacttacacggttaccaccgaaggc
cgattatctgaacccgaacaatttgagaatattattcttagagctgaaagtgacggtaat
gcgttacgtctaaaagatgtagctcgtattgaattaggggcacaagattacagcttcaac
gccacctttgatggcaagccaaccgtgccaatcggtgtctttttaaaaccaggtgctaat
gccctagaaacttctgatttaattgatagcaaattggctgagttatccaataattttcca
aatgggttagattatgctgtgccatatgacacgacagaatttgttaatatctctattgaa
aaagttatctacacgctgtttgaagccttgattttagtagtgttagtggtgttcttattt
ttgcaaaatgcgcgtgccaccttgattccagtcttagccattcctgtgtcgattatcggt
acctttgtgggtatgtatctacttggtttctcaatcaaccagctgacactgtttggcatg
atactcgccattggtatagtggtggatgatgcgattattgtggtcgaaaacgttgaacgt
attatgcactcagagaacctttcggcacgagaagcgacgattaaagccatgagtgaaatt
actggtccgattgtcgccatcgtacttgttttaggagcagtatttataccggttgccttt
atcgagggcctgacgggtcaaatgtatagacagtttgccattaccattgttatctcagtc
accatctctggtttggttgctttaactttgactcctgcattgtgtgccaatttactcaaa
cctgtacagactaaaaccagtggattcttttaccagttcaatcgattctttaccgccacc
actaacggctttaccttaggggtaagaactgttatgcgctatagcttaataagcgtgtta
ctttttggtggcctggtatttatcacttatcaatctttaggtggcttacctaaaggacta
ttgccacaagaagataaaggtacattgtttgttcttaactacctgccaccagcctcttct
ctggcaagaactgaagtggttcgtgatcaaacatcagagatgttacgccaacacgcaggc
gtagaccatgccattagctttgccggttttgacttacaaacctttaccaataaaaccgat
tctgcggtctcttttgtaagtttaaaacactgggatgaacgtcaagaacccaatgagagc
tcacctgctattgttggccaattatttgggcagttaatggcgattccagatgcctttagt
attccaataggcatgccgaccattatgggtatgagtatgacaggcggatttgaagcctac
ttacaaaaccgtaatggtgatggctccttagccctctccaaaacaacggatgaactcatt
gctaaagccacagcacgacctgagctagcttcagtcagaaccactttttcaactaaggtt
ccacaatacgaagtgaagctggatcgtgaaaaagcacaagcaatgcaagtgcctgtgaat
gatgttttttcagcgatgcaagccactttcggaacgctttacgtgaatgacttcaactta
tatggaagaacctacaaggttaatctacaatcagaagccaactaccgtgaaaaacctgaa
gatttagcgcaagtctttgtacgcgcccagacaggccacatgattccattaagttcatta
gtcagtgttaaaagattaacaggtgcggatgttattgatcgtttcaaccttttcccagcg
gctaaattgatgggagaacctgctcctggttatagttcaggacaagcgattgcggcattt
gaagaagtggctaatgaagtcatgcctgaaggttacagtcttggttgggtgggtgaagcc
tatcaagagaaacagtcatcaagctctggcaatcaggccttcttatttggtttattgttt
gttttcttaattcttgccgcgcaatatgaacgctggtcaattccgattgctgtattaaca
gcggtaccgtttgcggtattgggcgcaacgctagcagtcagtttaagtgggttacaaaat
gatatttatttccagcttggattactcactctcattggattatccgccaagaatgccatc
ttaattgtggaagtaggtatgcaaaagcacaaacaaggtatgcctctcgcagaagcagct
gaaacagctgctagactgagatttagaccgattgttatgacctctttagctttcaccatt
gctgcgattccactcatgttaagtacgggtgccggtgcagcggctcgtcaagccgttgga
acaggcctggtaggtggaatgattgccgccaccttatttgcgccactatttatacccatg
tttttccgctgggtagccgcgttttcagaacgttttggttcaaagaaaattcaggagtct
aagtaa
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