Thiomicrorhabdus lithotrophica: NR989_08490
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Entry
NR989_08490 CDS
T09486
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh00300
Lysine biosynthesis
tlh00550
Peptidoglycan biosynthesis
tlh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NR989_08490
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NR989_08490
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tlh01011
]
NR989_08490
Enzymes [BR:
tlh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NR989_08490
Peptidoglycan biosynthesis and degradation proteins [BR:
tlh01011
]
Precursor biosynthesis
Amino acid ligase
NR989_08490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WEJ62051
UniProt:
A0ABY8C7V5
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Position
complement(1813076..1814704)
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AA seq
542 aa
AA seq
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MTTAKPISAQPKNILEISQYLSNFIEGFDLSEVDAEYPEVTVKQMSLDSRAIQSNDLFIA
LQGEKSHGLDFLESVFLKLPGLVISDRVLTEQEQILLDAHNQSHNQKVRLWVVADIQSQL
GNFAAWFYDRPSQKLKVVGITGTNGKTSTAFFTGQLLKNLGHKVALIGTLGNGEIDNLQQ
SANTTPNSVQVQRLLNAFVEQGMDWVVMEVSSHALCLGRIQGVTFQTVALTQVTRDHIDF
HGTEEAYSEAKSRLFTEYETQSSVLNVADALGNKLCHEKLQKNNSETVWCYSSEQLKKTL
SADYKILPDLRCDNVQLTQQGIKFTPVFHNKRLADNLEIINLALMGLFNLENVLCAMSIL
LVNGFSWQVIKSKLPLLQSVAGRMQVLGKSPTIILDFAHTPDALEQVLTAVRSHLIDGNG
ALKVVFGCGGNRDQGKRPLMGAIAQSLADKVILTSDNPRDEAPAKIIKEIAAGINQSDSV
QSMVDRKEAISQVLDHAKEQDIIVIAGKGHEDYQEISGVKHPFSDAEVVQDWLLTKESKK
HG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcgaagccaataagcgcacaacccaagaacatattagagatttcccaatac
ctctctaattttatagaggggtttgacttgagtgaagttgatgctgaatacccagaagtt
actgttaagcagatgtcacttgattcgcgcgcaattcaatcaaatgacctgtttattgcg
ttacaaggtgaaaagagccatggtttagactttttagaatcagtttttcttaagttacca
ggcctggtaatttcagatagagttttaacggaacaagagcaaatattgttagatgcacat
aaccagtcacataatcaaaaagtgagattgtgggtggtggcagatattcaaagccagttg
ggaaattttgcggcttggttttatgacagacccagtcaaaagttaaaagtagtggggatt
accggcacaaacggtaaaacttccaccgctttttttacagggcagttactcaaaaattta
ggccataaggttgccttgattggcaccttaggcaatggcgaaattgataacctgcaacaa
agtgctaacactaccccaaatagtgttcaagttcagcgtttattaaatgcatttgttgag
caaggtatggattgggttgtgatggaggtttcttcgcacgctttatgtttgggtcgtatt
caaggggtaacgtttcagaccgttgcactaacgcaagtgactagagatcatattgacttt
cacggcactgaagaagcatatagtgaggcaaagtcacgtttatttactgaatatgaaacc
caaagctcggtattaaatgtcgcggatgctttaggtaacaaactttgtcatgaaaaactg
cagaaaaacaattctgagacagtatggtgttacagctcagaacagcttaaaaaaacgttg
tcggcagattacaaaattttgcctgacttacgttgtgataatgtgcaattaacccagcaa
ggtatcaaatttacacctgtttttcataataaacgattagctgacaacttagaaatcatc
aacttggctttgatgggattgtttaatcttgaaaatgtattgtgcgccatgtcaatttta
ttggtgaatggtttttcatggcaggtaataaaatccaaattaccattgttacagtccgtc
gctggacgtatgcaggtgttgggcaagtcacccactattatcctagattttgcacatact
ccagatgcattagaacaggtgttaaccgcggtaagatcgcatcttattgatgggaatgga
gcgctaaaagttgtttttggttgtggaggtaatcgcgatcagggtaagcgtcctctgatg
ggcgcaatagcccaatctctagcggataaagtgatactgaccagtgataatccaagagat
gaagcgccggcgaaaattataaaagagatagcagcgggtataaaccaaagcgattcagtt
cagagtatggttgatagaaaagaggccattagccaagttctagatcatgctaaagaacaa
gatattatcgttattgctggcaagggtcatgaagactatcaagaaatatcaggtgtgaaa
cacccttttagtgatgcggaagtcgttcaagattggttactaaccaaagagtctaaaaaa
catggttaa
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