Temnothorax longispinosus: 139817199
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Entry
139817199 CDS
T10889
Symbol
Roc1a
Name
(RefSeq) RING-box protein 1A
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
tln Temnothorax longispinosus
Pathway
tln03420
Nucleotide excision repair
tln04120
Ubiquitin mediated proteolysis
tln04141
Protein processing in endoplasmic reticulum
tln04310
Wnt signaling pathway
tln04341
Hedgehog signaling pathway - fly
tln04350
TGF-beta signaling pathway
Brite
Enzymes [BR:
tln01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
139817199 (Roc1a)
Ubiquitin system [BR:
tln04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
139817199 (Roc1a)
Multi subunit type E3
SCF complex
Ring finger protein
139817199 (Roc1a)
Cul2 complex
139817199 (Roc1a)
Cul3 complex
139817199 (Roc1a)
Cul4 complex
139817199 (Roc1a)
Cul7 complex
139817199 (Roc1a)
Cul8 complex
139817199 (Roc1a)
Cul9 complex
139817199 (Roc1a)
DNA repair and recombination proteins [BR:
tln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
139817199 (Roc1a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
139817199 (Roc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139817199
NCBI-ProteinID:
XP_071641190
LinkDB
All DBs
Position
8:complement(4595210..4596942)
Genome browser
AA seq
113 aa
AA seq
DB search
MATTMEIDDDECDLPTSSTGKGEKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaccatggagatcgacgatgacgagtgcgatctgccgacctccagcaccggg
aaaggcgagaagaaacgtttcgaggtgaagaagtggaacgcggtggcactatgggcctgg
gatattgttgtggacaattgcgctatttgccgtaatcacatcatggacctctgtatcgag
tgccaggcgaaccaggcgtccgccacaagcgaggagtgcacagtagcttggggcgtatgc
aaccacgccttccattttcattgtatctcacgttggctgaaaacaagacaggtgtgtcca
cttgataatcgtgaatgggagtttcagaaatatggtcattaa
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