Temnothorax longispinosus: 139818555 Help Entry 139818555         CDS       T10889                                  Name (RefSeq) otoferlin isoform X1   KO K19949   otoferlin Organism tln  Temnothorax longispinosus Brite Membrane trafficking [BR:tln04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     139818555 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-GeneID:  139818555 NCBI-ProteinID:  XP_071643385 LinkDB All DBs Position 9:3499972..3536630 Genome browser AA seq 2079 aa AA seqDB search MSLVVILKNIQGLKCKGEKVAKIDFREVSHYSSLLEDSGDVIEVEQSFTWNLGRPVDEAE VLQLAIVSRGVLRYEKVAARYGLVLQTVVREGRILVSDSLVDLNNKPLPAVVCFEIRYNP PDGSCSSYAVSEIMEDEQQMLIDIEQNIANLERSLEQANSSSTSGKRRGSWHTPEKTSKK GFLPRGTSLSTSEKSPDTRKRSTALRSVRSLLKFGKQRPPRTRSCDSGSETRELLDRQDS SCPTSNEPSRTNSMTSLETNASDNDSQLSAKPEQEETVAKPAKRSKPKTSDTWQSALKAQ DYQVCVTIIEARQLAGLNMDPVVCVQIGDQRKYTSVKESTNCPYYNEYFVFDFHMPPVML FDKIITLSVQQSRNLLRANLTLGSFKLDIATVWAQPDHQFYHKWALLTDPDDVAGGPKGY LKCDISVIGKGDTVKIPPKSEKDEDDIEGNLLLPDGVPIERQRARFVVKVYRADGLPKMN SSIMANVKKAFTGEVKDLVDPYVQVSFAGLSGKTSVKRHSYAPVWNEQIVFTEMFPPLCQ RIKIQLCDNDPVHATVIGTHFVDLKQISNDGEKGFLPTFGPAFIHFYGSIRDYSLIDEHS TLNTGLGEGISYRARLLIAIRTEITDNVEMAPSEVEVEPTVPVNETAYARNEEFFLYATI MDATMIDKKLGDKPMYFEISIGNAGNALDGHNESFKMYETGSKGGTSGEEEDLQEVFAGS WQSTTPASKPMTHDKIYYFLPYWDDKPCLHVRSIWPDYRRRMYNSNIIGKIVDKLEEGLS EVQSHLEDSTCEKLLKSTLEELSANCNRYVSISKSSVTGPGVGKTKLDKERAKLCQREVE NIGILSRNLKAVVTKSSFKERLKTAHSYLQKLKFLVEDPQDSLPDVFIWVISSGRRVAYQ RIPGRELIYSVVDEECGRHCAKVQTMFLKLPGKKRFGPSGWAIQTKLQIYMWLGILKHKK YFIQGLPKGYEVSHELRNVDRPRALPPTVIHYVQKHKFQLRAHMYQARSLIGSDASGLSD PFARVICGEFCKCTQVIDETLSPTWDELLLFDDILIYGTAEEIKKEPPSIVIELFDQDKV SHIVAMDITLHEGSALTGKSEYIGRAIARPHVKLASESYTPPQYPPSLEWYDVTRGASRA GELLAVFELLEYPSTKDYGFPTLPDPKDSSCGPQAPGSGQDQGPILPVPVGIRPTLSKYR IEVLFWGLRDLKRIHLLTVDKPRVDVECAGHILYSSVIANAKKNPNFNTPIKFLELELPE QELYRPPLTIRAVDCRSFGRYTLVGTHTINSIHKYMYYPLTKRAKDAQERKKSLYQLQCA ALDPSKSKFQQTSLLESMTDLEANNGDTIITLGFELGCGPTKKDKTEQNLRRKQSLANDN NIGDLSALEDGDGCQDWWTKYFASVEAMIEENKELRKEKSIFQNQPNGTLPMLLDEAVTQ SQLTASGDKNPGTNPTKRLFGLKSPTNAVKFVSRLSPKHTQHKYNKAALLKVYPGELEAQ PEFEQFKEWLHTFELYRGKKTGDETEDESRIVGSFKGALKVYKWPLPKDLLDHTVMGFDP QYGFFQGVPSNEPIHVLVRVYIVKANDLHPCDLNGKADPYVVLQLGSKRISDKEHYVSKQ LNPVFGKCFEIEATFPQDSLLTVQVLDWDLVGTDDMIGETKIDLENRFYSRHRATCGFAK KYDESGYNTWRDAMKPTQILSKLCKDGKIDGPVYSHGRVTIGRKTFSLSNEEMEYYVHTK GMEEHLALAVLHQWNAFPRIGCALVPEHVETRPLYNPEKPGIEQGKLEMWVDMFPMDMPS PGPSIDISPRKPKSYELRVIIWNTDDVVLEDDAFFTGEKMSDIYVKGWLKGPEDCQSTDI HYRSLTGEGNFNWRFIFPFDYLVAEEKIVINRKESLFSWDETECKIPARLELQVWDADHF SADDFLGAITLDLNRFPRGAKNSKLCSLGMLKTDGSVPMVNIFKQKRIKAWWPFYVKKEN EDMELTGKVEAEIHLLTKEEAEKNPAGFCRNEPDPLDKPNRPDASFMWFLNPLKSIKYIV WHNYKWAILKAIIAIGLIILLLLFFYAIPGYSVKKILGA NT seq 6240 nt NT seq  +upstreamnt  +downstreamnt atgtcgctcgtcgtcatcctgaagaacattcagggtcttaagtgcaagggcgagaaagtc gcgaagatcgactttcgagaagtatcacattattcgtcgttactcgaggatagcggggat gtcattgaggtcgagcagagtttcacgtggaacttaggaagaccggtggacgaggcggaa gtgctgcaactagcaattgtatcgcgcggtgtcttgagatacgaaaaagttgcggcaaga tatggactggtgttgcagacggtggtgcgcgaagggaggattctggtctcggattcgcta gtcgacctcaataacaagccgcttccggcggtggtgtgcttcgaaattcgatacaatcct ccagacggaagttgcagctcgtacgcggtctcggaaataatggaggacgagcaacaaatg ttgatcgacatcgagcagaatatcgcgaatctcgagagaagcctcgagcaggccaacagc agttcaaccagcggaaaaagaagaggatcatggcatactcccgaaaaaacatcaaaaaaa ggcttcttgccaaggggtacttctctatcgaccagcgaaaaatcacctgacactcgaaag cgaagcaccgctttgagaagcgtacgatccctgctgaaatttggaaaacagagaccgcca cgtactcggtcctgcgacagcggctcggaaacgagagaacttctcgacagacaggattcc agctgtccgacatcgaacgagccttcgcgaacaaactctatgacgtccctcgaaacgaat gcttccgataacgacagtcaattaagcgccaaacctgagcaagaggagactgttgcaaag ccggccaagagatctaagcctaagacgagcgatacctggcaaagtgcgttaaaagcccaa gattatcaagtgtgcgttacgatcatagaagcgcggcagctcgccggtctcaacatggat ccagtcgtctgcgtgcaaatcggagatcaacgcaaatatacgagcgtcaaggaatccacg aattgcccatattacaacgaatactttgtcttcgatttccacatgccgcctgttatgctg ttcgataaaattattacgctgtcggtgcagcaatcgcggaatctcttgcgcgctaatcta acgctgggcagctttaaattagacatcgcgacggtatgggcacaaccagatcatcaattc taccacaaatgggccctgctcaccgacccggatgacgttgccggtggacccaagggctac ctaaaatgtgacataagtgttattggcaagggcgacaccgtgaagatccctccgaaaagt gaaaaggacgaggacgacatcgagggaaatcttttattgccggacggtgtgccgattgag agacaacgcgcgagattcgtggtgaaggtttacagagctgacggcttgccaaaaatgaac agcagcattatggcgaacgtgaagaaggctttcacgggggaagtgaaggatttggtggat ccatacgttcaagtgtccttcgccgggctcagcgggaaaacaagtgtgaagaggcatagc tacgctccagtatggaatgaacagatagtttttaccgagatgtttcctcccctctgtcag aggataaagatacaattgtgcgataacgatccggtgcacgccaccgtcatcggtacacac ttcgtcgatttaaagcagatcagcaacgacggcgaaaagggtttcttgccgacctttggt ccggcgtttatccacttttatggcagcatcagagattacagtctcatagacgagcattcg acgttgaacaccggcttgggcgagggaatttcatatagagcaagattattaatagcgata cgaactgagatcaccgataacgtagaaatggcaccgtcggaagtcgaagtggaaccgaca gtgcctgtcaacgaaaccgcctacgcgaggaacgaggagttctttctgtacgccacaatc atggacgccacgatgattgacaagaagctcggcgataagccgatgtacttcgaaatatct attggaaatgcaggcaacgctctcgacggtcacaatgaaagtttcaagatgtacgagaca ggatcaaagggtggaacgagtggggaagaggaagacctgcaggaagtcttcgctggatcc tggcaaagcaccacaccagccagtaaaccaatgacgcacgataagatttattatttctta ccgtactgggacgacaagccgtgccttcatgtaagaagcatatggccggattacaggcgt cgaatgtacaacagtaacattatcggcaagatcgttgacaaactggaggaaggactgtcg gaagtacaatcgcacttggaagactcaacgtgcgaaaagcttttaaaatctactctcgag gaactgagcgctaattgtaaccggtatgttagtattagcaagtctagcgtgaccggtccg ggcgtcggaaaaacgaaactggacaaggagcgtgcgaaactatgccagcgggaagtggag aatatcgggattctgtcgcgcaacctcaaggccgttgtgactaaaagcagcttcaaggaa agattgaagacagcccacagctatttgcagaaattaaagtttcttgtcgaagatccgcaa gactctttgccggacgtgttcatctgggtgatcagctccggaagacgagtggcgtaccag aggataccgggtcgcgaactgatttactcggtggtcgacgaggaatgcggccgacattgc gccaaggtgcagactatgttcctcaaacttccaggcaaaaagagattcggaccctcgggc tgggcgatccaaacgaaattgcagatctacatgtggctagggatactgaagcacaagaag tacttcatccaaggtttaccgaagggatacgaggtcagccacgagttgaggaacgtggac agacctcgcgctttgccgcccactgtaattcactatgtccagaagcacaaatttcaattg agggcccacatgtaccaagcgaggtcgctgatcggcagtgatgcgtctggcctctcggac ccatttgcgagggtaatctgcggtgagttttgcaagtgcactcaggtgatcgacgaaacc ctcagtccaacgtgggacgagttgttgctgttcgatgacattttaatctacggcaccgcc gaggagatcaagaaggaaccaccctccatcgtcatcgagttatttgatcaggataaagtg agtcatattgtagctatggacataacactgcatgagggctctgctttgacaggaaaatcg gagtacatcggtcgggcgattgcgcgacctcacgtcaaactcgcctccgagtcttacact cctccacaatatccaccgtccttagaatggtacgatgttacaagaggagcttcgagagct ggcgagcttctggcagtcttcgaattgttggaatatccctctaccaaagattatgggttt cctactttgccagatcccaaagattccagctgcggacctcaggctccgggttccggacag gatcaaggcccgattctgcctgtgcccgtgggaattcgacctactttatcgaaataccga atcgaggtgctattttggggtttgcgggatctgaagagaattcatctcctaactgtcgac aagccccgcgtggacgttgaatgcgccggtcacattctctattcgtctgtcatagcaaac gcgaagaaaaacccgaatttcaacacgccgatcaaatttctagaattggagcttcctgaa caggagctttatcgcccgccattgaccataagagcagtggactgtcggagttttggtaga tacaccctcgtcggtactcacaccatcaattcaattcacaagtacatgtactacccttta actaaaagggcgaaagacgctcaagagaggaagaagagtttgtatcagttacagtgcgca gctctcgatccatctaaatcgaaattccaacaaacgtcattactcgaatcgatgactgat ttggaagctaacaatggtgataccattatcactcttggattcgagttgggatgtggtcct acgaagaaagataaaacggaacaaaacttacgtaggaagcagagcttagctaatgacaac aatataggcgatttaagcgcgttagaggacggagatggctgccaggactggtggacaaag tactttgcctctgtagaagcgatgatcgaggagaacaaagaactgcgcaaggaaaaatcc atattccaaaaccagccaaacggaacgctaccaatgctcctagacgaagctgttacgcaa agtcagttgaccgcctcgggcgacaagaatcccggaactaatcctacaaagaggctgttc ggtttgaagtcaccgacaaacgcggtgaagttcgtctcgaggctcagtccgaagcacacc caacacaagtataacaaggctgctctactgaaggtgtatcccggagagttggaggcgcaa cccgagttcgagcaattcaaggaatggttgcacactttcgagctgtatcgaggcaagaag accggcgacgagaccgaggacgagtcaaggatcgtcggcagcttcaagggcgcattgaag gtctacaagtggccgctgcccaaggatctgctggatcacaccgtgatgggtttcgatccg caatacggattcttccagggtgtcccgtcgaacgagcctattcacgttctggtacgggtg tacatcgtcaaagctaacgaccttcatccctgcgatcttaatgggaaagcagatccctat gtggtcttacaattgggaagcaagaggattagcgataaagagcattatgtgtcgaaacaa ctgaatcccgtcttcggaaaatgtttcgagattgaggcaacatttccgcaggattctctg cttaccgtacaagtcctagattgggacttggtcggaacagacgatatgatcggcgagacc aagatcgatctggaaaatcgcttctacagcagacaccgagctacgtgcggattcgcgaag aaatacgacgaatctggatataatacatggagagatgcgatgaaaccgactcagatactc tcgaagctatgcaaagatggtaaaatcgatgggccagtgtattctcacggacgcgttaca atcggcagaaaaaccttctccctctcgaacgaggagatggaatattatgtgcatacgaag ggaatggaagaacatctcgccttagccgttcttcaccaatggaacgcctttcctcgaata ggctgtgccctggtacccgaacacgtggagacccgaccgctctataatcctgagaaaccc ggaatcgagcagggtaaattggaaatgtgggtggacatgtttccaatggacatgccctcg cccggaccgtccatcgatatttcaccgagaaagcccaagagttatgaattgagagttatc atatggaatacagacgacgtcgtcctggaagacgacgctttcttcaccggcgaaaagatg agcgacatttatgtaaaaggatggctaaagggaccggaggactgtcagtccaccgatatt cattatcggtcattgaccggcgaaggaaactttaactggcgcttcatatttccattcgat tatctagtagcagaagagaagatcgttatcaatcgtaaagaaagcttatttagctgggac gagaccgaatgtaaaataccagcacgcctagaattgcaggtctgggatgcagatcatttc tccgcagatgatttcttgggcgcgataactctcgatctcaatcgatttccccgaggagcg aaaaatagtaagctctgctcattaggcatgttaaagacggacggctccgtgccaatggtt aacatcttcaagcagaaacgtataaaagcatggtggccgttttacgtgaagaaagagaat gaagacatggagctaacgggcaaggtcgaagctgagatacatttgctcacgaaagaggag gccgagaaaaatcctgctggtttttgtagaaacgaacccgatccactggacaagccaaat cgaccagatgcatctttcatgtggtttctcaatccactgaagtccatcaagtacatagtt tggcataattataaatgggctattctgaaagctataattgcgatcggattgatcatactt ttgctcttattcttttatgcaataccaggttactccgtaaagaagatcttgggagcttaa

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