Thiothrix litoralis: J9253_06885
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Entry
J9253_06885 CDS
T07754
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tlo
Thiothrix litoralis
Pathway
tlo01501
beta-Lactam resistance
tlo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J9253_06885
01503 Cationic antimicrobial peptide (CAMP) resistance
J9253_06885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tlo03036
]
J9253_06885
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlo02000
]
J9253_06885
01504 Antimicrobial resistance genes [BR:
tlo01504
]
J9253_06885
Chromosome and associated proteins [BR:
tlo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
J9253_06885
Transporters [BR:
tlo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
J9253_06885
Antimicrobial resistance genes [BR:
tlo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J9253_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
BSH_CzcB
BSH_CusB
Beta-barrel_RND_2
RND-MFP_C
CzcB_C
BSH_YknX
NQRA_N
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QTR48360
UniProt:
A0ABX7X5G5
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All DBs
Position
complement(1433377..1434513)
Genome browser
AA seq
378 aa
AA seq
DB search
MNNKKSAFVGLIGVVLGIGFPTGAQSAEIIPVEVSSTQSQSVLGSTVVPYKEVTLTAQIP
GVVKRVAGGVGASFAAGNTLVQIDDSQLQAKRNAVAAQIGTAQSGVTNAQAQYNREQMSP
RSKDIGAMPGFGMPAMFDRLGTRQFASTFMGGYDDKTIRQADLENSRATVLQAQGGLQQA
SAQLQELDAAIGNATSTAPFEGMILSKQVEVGDTVQPGQPLLTYGYIKNKRLQSDVPSGL
VAGLQVGMTVAARINSNFDTTAKVAEIYPLADPTRHTVTVKFDLPADVEATPGTYAEVHL
PEGDSAASLFIPKTALFKGSSLPSVLVVKDGKSQLRLVRLGTDQGKDKVEVISGLDATEQ
IINDPPVGVVSGWMPPAK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaaaaagtccgcgtttgtggggctgataggtgtggtattgggtatcggtttt
cctaccggtgcgcagtctgccgagattattcccgttgaagtttccagtacccaaagccaa
tcggtgctgggtagtacggttgtgccttacaaggaagtgaccttgacagcacaaataccg
ggggtagtgaagcgggtggcggggggcgttggcgcttctttcgccgcaggcaataccctt
gtgcagattgatgattcacagttgcaggccaagcgcaatgcggtggctgcccagattggc
actgcacagtctggggttaccaatgctcaggcacaatataaccgcgagcagatgtcaccc
cgtagtaaggatattggcgcgatgccgggttttggtatgcctgccatgttcgacagactg
gggacacgccagtttgccagtacctttatgggagggtatgacgataagactatccgtcag
gcagatttggagaatagccgtgcgactgttcttcaagcacaaggtggtcttcaacaagcc
agtgcccagttacaggaactggatgccgctatcggtaatgcaacctcaaccgctccgttc
gagggcatgatcctatcaaagcaggttgaggtcggtgataccgtccagcccggtcagccg
cttctcacttacggttatatcaaaaacaaacgcctgcaatcggatgtaccttctggcttg
gttgcgggtttgcaggtgggaatgaccgtcgcggccagaattaacagcaacttcgacaca
acagcgaaagtcgccgagatttacccattggctgacccaacccgtcatacggtgacagtc
aaatttgaccttcccgccgatgttgaggcaacgccaggcacgtatgccgaagtgcatttg
ccagaaggtgatagcgccgccagcttgttcattcccaaaacagccttgttcaaaggtagc
agtttgcccagtgttttggtcgttaaggatggcaaatcacaattacggctggtgcgcctt
ggaaccgatcaaggcaaggataaagtcgaagtcatctcaggtttggatgccacagaacaa
atcatcaatgatccacccgttggcgtcgtttctggctggatgccacctgcgaaataa
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