Thiothrix litoralis: J9253_20245
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Entry
J9253_20245 CDS
T07754
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tlo
Thiothrix litoralis
Pathway
tlo01501
beta-Lactam resistance
tlo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J9253_20245
01503 Cationic antimicrobial peptide (CAMP) resistance
J9253_20245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tlo03036
]
J9253_20245
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlo02000
]
J9253_20245
01504 Antimicrobial resistance genes [BR:
tlo01504
]
J9253_20245
Chromosome and associated proteins [BR:
tlo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
J9253_20245
Transporters [BR:
tlo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
J9253_20245
Antimicrobial resistance genes [BR:
tlo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J9253_20245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
RND-MFP_C
BSH_RND
YknX_C
Beta-barrel_RND_2
BSH_CusB
BSH_YknX
Biotin_lipoyl
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
QTR48496
UniProt:
A0ABX7WYT4
LinkDB
All DBs
Position
4159638..4160744
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AA seq
368 aa
AA seq
DB search
MLWSIGWLPAVHCAEIVRVETVQSLSRSVLGSTVIPYKEVTLSAQIPGAVKFVAGEAGSG
FRQGDVIIQIDESQLMAKRNAILAQISIAQASVRNSQAQYTRELVSPRSKDIGAMPGFGL
PAMFDMNMVQPFANSMMGNYDSDMGRYGDLMSSATGVSQAQSNLQQAMSQLQEIDAALRD
AKSVAPFEGIVLEKMVEVGDTVQPGQPLIKYGYVKYKRLQADVPSGLVSNLSVGMIVPAK
IDSDATTMVKITQIYPVADPSRHTVTVKFDLPVDAVAAPGMYAEVYLPESRQGDAKVVVI
PETALLRGRSLPSVLVVTNNNTSELRLVRLGAEQEDGKVEVVSGLSDDERVIDNPPSTAS
SGWMPHAE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggagtattggctggctgcctgctgtgcattgcgctgagattgtcagggtggaa
actgttcagtcactgtcacgttctgtgctgggaagcacggttattccgtataaggaagtt
acgttatccgcccagattccgggggcggtcaagtttgttgcgggcgaagcgggttccggt
tttcgtcagggtgatgtgattattcagatagatgaatcgcagttgatggccaagcgtaat
gctattctggcgcagatttccattgcccaggcttccgtgcggaattctcaggcgcaatat
acccgcgagttggtgtccccccgtagtaaggatattggtgcaatgcccggttttggcttg
cccgcgatgtttgacatgaacatggtgcagccgttcgcgaattccatgatgggcaattat
gactctgatatggggcgttatggcgacttgatgagcagcgcgacaggggtgtcgcaggcg
cagagcaatttgcagcaggcgatgtcgcaattgcaggaaattgatgcggctttgcgtgat
gccaagtcggtggctccttttgagggtatcgtgctggaaaaaatggtggaggtgggcgat
actgtccagcccggtcagcctttgatcaaatacggttacgtcaagtacaagcgcttgcag
gccgatgtgccgtcagggttagtgagtaatttgagcgttggcatgattgtccctgccaag
attgacagtgatgctaccacgatggtgaaaatcacccagatttacccggtggctgatccc
agccgccatacggttacggtgaaatttgatctgccggtggatgcagtcgcagcaccggga
atgtatgccgaagtctatctgcccgaatctaggcagggtgatgccaaggtggtcgtcatc
ccggaaacggcattgctcagggggcgtagcctgcctagcgtactggttgtgactaataat
aatacctcggaattgcgcttggtgaggctcggcgcagagcaagaggatggtaaagtagaa
gtggtttccggtttgagtgatgatgagcgtgttattgataatccgcccagcactgcttct
tctggttggatgcctcatgcagaataa
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