Thiorhodovibrio litoralis: Thiosp_01798
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Entry
Thiosp_01798 CDS
T09560
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tlr
Thiorhodovibrio litoralis
Pathway
tlr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Thiosp_01798 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlr03400
]
Thiosp_01798 (nth)
Enzymes [BR:
tlr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Thiosp_01798 (nth)
DNA repair and recombination proteins [BR:
tlr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Thiosp_01798 (nth)
Prokaryotic type
Thiosp_01798 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Ogg-HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WPL12043
LinkDB
All DBs
Position
complement(2003404..2004033)
Genome browser
AA seq
209 aa
AA seq
DB search
MNRAKRTEIFTRLRAANPHPTTELRYNSPFELLIAVILSAQATDKSVNKATETLFAVANT
PDAMLALGEAGLSTYIRTIGLFNSKAKNIIKTCALLIDQHQGEVPRERAALEALPGVGRK
TANVILNTAFGEPTIAVDTHIFRVANRTRIAPGKTPLAVEQKLLRLVPREFLQDAHHWLI
LHGRYTCTARSPGCSQCAIADLCEYPDQR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaacagggccaaacgcaccgagattttcacccgcctgcgcgctgcgaatccgcatccg
accacggagttgcgctacaactcgccgttcgagttgctgatcgctgtgatcctgtccgct
caggccacggataagagcgtcaacaaagccaccgaaacgctttttgccgtagccaacacc
cctgacgcgatgcttgcgctaggcgaggcgggcttgagcacgtacatccgcaccattggg
ttgttcaacagcaaggcgaagaacatcatcaagacttgcgccctgctcatcgaccagcat
cagggcgaggttccgcgtgagcgcgcagcgcttgaggcgctgcccggtgttgggcgcaaa
accgctaatgtgattctcaacaccgcgttcggcgagccgaccatcgccgttgatacccat
atcttccgcgttgccaaccgcacgcgcatcgctccgggcaagacaccgctggcggtcgag
caaaagctgctccgtttggtgccgagggaatttctgcaagacgcccatcattggcttatc
ctgcatgggcgctacacctgcaccgcgcgcagcccaggctgcagccagtgtgcaatcgcg
gatttgtgtgagtatcccgaccagcgctga
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