KEGG   Thiorhodovibrio litoralis: Thiosp_02481
Entry
Thiosp_02481      CDS       T09560                                 
Symbol
casD
Name
(GenBank) CRISPR system Cascade subunit CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
tlr  Thiorhodovibrio litoralis
Brite
KEGG Orthology (KO) [BR:tlr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tlr02048]
    Thiosp_02481 (casD)
Prokaryotic defense system [BR:tlr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    Thiosp_02481 (casD)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: WPL12705
LinkDB
Position
2734644..2735330
AA seq 228 aa
MRSFLILRLDGPMQSWGLHSFEDYRPTNHFPTRSGLIGLFGACLGIERADQDRLSALNKS
VEIAIRDDQGLDSGNRDELVASSEKSPQVATDFHTVLQARKVGGRVNRYPVVSRREYLFD
ARFTIAIGERAGAQFNLERIAKAAQHPCFTPVLGRRSCPLARPLLETTKPIEAADVIAAL
MRVEPVGGTIYAEEPVSDQPLGLRDVPRATPFRQFDQRLIYVHREAGK
NT seq 687 nt   +upstreamnt  +downstreamnt
atgcgttcttttctgattctccgcttggatggcccaatgcaatcctggggtctgcatagt
ttcgaggactatcggccgaccaatcatttcccaacccgtagtggacttattggactcttc
ggtgcctgtcttggcatcgaaagggctgatcaagaccgcttgagtgccttgaataagagc
gttgaaatagctatccgcgacgatcaagggttagactcgggcaaccgggatgaattggtc
gcttcatcggagaaaagccctcaagtcgcaacagacttccatactgtgttgcaggcacgc
aaggtaggtggtcgggtcaaccgttatccagtcgtctctcgacgcgaatacctcttcgat
gccaggttcaccatcgccatcggcgagcgtgcgggcgcccaattcaatttggagcgtatc
gcaaaggcggcccagcatccctgcttcacgccggtactcggacggcgttcctgcccgctc
gcgcgtcccttgctagagaccactaagccgattgaagccgccgatgtgattgctgcactc
atgcgtgtcgagccggttggcggcaccatctatgccgaggaaccggtctccgatcaaccg
ctcggattaagagacgtgccgcgcgcgaccccgttcagacagttcgatcaaagactgatc
tatgtgcatcgggaggctggcaaatga

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