Thalassospira lucentensis: R1T41_09945
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Entry
R1T41_09945 CDS
T09476
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tlu
Thalassospira lucentensis
Pathway
tlu01501
beta-Lactam resistance
tlu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R1T41_09945
01503 Cationic antimicrobial peptide (CAMP) resistance
R1T41_09945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlu02000
]
R1T41_09945
01504 Antimicrobial resistance genes [BR:
tlu01504
]
R1T41_09945
Transporters [BR:
tlu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
R1T41_09945
Antimicrobial resistance genes [BR:
tlu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R1T41_09945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
WOI12898
LinkDB
All DBs
Position
2021469..2024621
Genome browser
AA seq
1050 aa
AA seq
DB search
MQDGNQNENQNDLASLSIRRPVLISVVSLLIILAGLAAMLGVEIRELPNVDQPTVTVYAT
YDGASPETVDAEVTSLLEGAASRVSGVKRISSNSEEGTSRVRVEFYPDIEINDAANDIRE
AVSRASRTLPDEVEDVRVVKADADASAIMRLAVVSNRLTEEELANIVDDQISPALLSVPG
VAEITINGEREKVLHVRVDPLRLASYGFSVQDVADVLRTAKFDIPAGSFDSSDQKLFVRA
DASVWEVEDVKQMFIRNQVRLGDVADVYYGPDDATSYVRLDGRTVIGLGVVRQAQSNTIA
ISDGIREVAERLNSQYDDIDVFVNSDDAVFIEGALWEVLNSLALAIIIVIGVLYLFLRSF
TATLIPTVTIPIALVGTVAAIWMMGFSINILTLLALVLATGMIVDDAIVVLENIQRRRHQ
GLGSMAAAVLGTRQVFFAVIATTLTLVSVFVPISFLPSTAGRLFREFGFVLAFSVAVSSF
VALSLCPMLASRLKHIDPHDGQKDAKPNFLERIGLYCSGVYKYILEWVLRFPLITLIVSI
FAGVLAFGVYNTVTQELLPDEDRGRILVSLRGPDGVGIDYMDRQVETVENILRPIVEAGD
AYNIYTIVGLWDPNRALVIAPLVPWNERSRSQQNISNSIRGSLEALPGVQAFVYQPNSLG
LRGGTGEGFEFALTGTNYRTLAANARAMQQELEANYPQFVGLRVSYQTTQPQLLVNIDRQ
RAFDLGIPIESLDTTLRTMIEGYEVTEITVDDENIPVKLRSSAGSINDPSDLENLFVSNG
EGRILPLSSVISLTEEAVASELEREGQQRAVKISGNLAPGYTLQQAVVDIDEVADRVLPP
GMSVLFLGDAATLGETSHDVQITFLIAVLVVLLVLAAQFESFMSALVVVLTVPFGLAAAI
YALGLSGTSINIYSQIGLVMLVGLMAKNGILVVEFADQLRDAGKSVREAVHDAAMIRLRP
IMMTMISTVLGGLPLVLGTGAGAEARAAIGWVVFGGLGFATVFTLFLTPVLYLLLAPLVS
ARADGGKKLQSQLRSAESIPDKGEIEGSTS
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgggaatcagaacgaaaaccagaatgatctggcgtcactcagcatccgtcgc
cccgttcttatttccgtggtgtcgcttttgatcattctggcgggtcttgccgccatgctg
ggtgttgaaatccgcgagctgcccaacgttgatcagccgacggtcacggtttatgcgacc
tatgacggggcctcgcccgaaacggttgatgccgaggtcacaagccttcttgaaggggca
gcgtcgcgcgtcagtggtgtcaaacgcatcagttcaaacagcgaagaaggcacgtcgcgg
gttcgcgtcgaattttatcccgatattgaaatcaatgatgcggccaatgacattcgcgag
gcggtcagccgcgcatcaagaacccttcccgacgaggtcgaggatgtccgcgtggtcaag
gccgatgcggatgccagtgcgatcatgcggcttgcggtggtcagcaatcggctgaccgag
gaagagctcgccaatatcgttgatgaccagatcagcccggcgctgctttccgtgcccggt
gtggccgaaatcacgatcaatggcgaacgcgaaaaggttctgcatgtccgggtcgatccg
ctgcgactggccagttacggcttttcggttcaggacgttgccgatgttttgagaaccgcc
aagttcgacattcccgccggcagttttgattccagcgatcagaagctttttgtccgggcg
gatgcgtcggtctgggaggtcgaggacgtcaaacagatgttcatccgcaatcaggtgcgg
ctgggtgatgtagcggatgtctattacgggcccgatgatgcgacatcctatgtgcgcctt
gatggccggaccgtgatcgggcttggcgttgtcaggcaggcgcagtcaaacacgattgcg
atatcggatggcattcgcgaggtggccgaacggctgaacagtcagtacgacgatatcgac
gtgttcgtgaactcggacgatgcggtgtttatcgaaggcgcgctttgggaagttctgaac
agtctggcgctggcgatcattatcgtgatcggggttctgtatcttttcctgcggtccttt
accgcgacactgatcccgacggtgaccattccaattgcgcttgtcgggacggtggccgcg
atctggatgatgggcttttcgatcaatatcctgacgttgctggcgcttgttctggcgacg
gggatgattgttgatgatgcgattgtggtgctggaaaacatccagcgccgccgtcatcag
ggattgggatcgatggcggccgcagttctggggacgcggcaggtgttttttgcggtgatt
gccaccacactgacgctggtatcggtgtttgtgccgatttcgtttttgccaagcacggca
ggccgccttttccgggaatttgggttcgtgctggcattttcggttgcggtgtcttcgttt
gttgccctgtcactgtgcccgatgctggcgtcgcggttaaagcatatcgacccgcatgac
gggcaaaaggatgccaagcccaacttccttgaacggatcggcctctattgttcgggtgtt
tacaaatacattctggaatgggttttgcggttcccgctgattaccctgatcgtgtcgatc
tttgccggggtgctggcatttggggtctataacacggtcacacaggaacttctgcccgac
gaggatcgcgggcgtattcttgtatcgctgcgcgggccggacggggttggcatcgattac
atggaccggcaggtcgaaacggttgaaaacatcctgcgtccgattgtggaggccggtgat
gcctataacatctataccattgtcgggctttgggatccgaaccgtgcgcttgtgattgca
ccactggtgccgtggaacgagcgcagccgcagccagcagaatatcagcaattcgatccgc
ggaagtcttgaggcattgcccggtgttcaggcctttgtctatcagcccaacagccttggt
ttgcgtggtggtaccggcgagggatttgaatttgccctgacggggacgaattaccgcacg
ctggcggcaaatgcgcgcgccatgcagcaggagcttgaggcgaattatccgcagtttgtc
ggtcttcgggtttcctatcaaacgacccagccgcaattgttggtgaatattgatcggcag
cgcgcctttgaccttggcattccgattgaaagccttgatacgacccttcgcacgatgatc
gagggatatgaagttaccgagatcacggtggatgatgaaaacatcccggtgaagctgcgc
agcagtgcgggcagcatcaatgacccatccgatcttgagaacctgtttgtcagcaatggc
gagggtcgtattttaccgctgtcatcggtcatcagcctgaccgaagaagcggttgcatcc
gaacttgaacgcgaagggcagcagcgtgcggtcaagatttcgggcaatcttgcgccgggt
tataccctgcagcaggcggttgtcgatattgacgaggttgcagacagggtgctgccgccg
ggcatgagcgtcctgttccttggcgatgcggcgacacttggcgaaacgtcgcatgatgtg
cagatcacgttcctgattgcggtgcttgtcgtgttgctggtgcttgccgcgcagttcgaa
agcttcatgtcggcccttgtggttgtcctgaccgttccgttcgggttggcagcggcaatt
tatgcgctgggccttagcggcacatcgatcaatatctatagccagatcgggttggtgatg
ctggtcgggcttatggccaagaacggcattctggtggtggaatttgccgatcagttgcgc
gatgccgggaaatccgtgcgcgaagcggttcatgatgcggcgatgattcgcctgcggccg
atcatgatgacgatgatttcgaccgtgcttggcgggttgccgcttgtgcttggcaccggg
gccggggccgaggcgcgtgcggcgattggctgggtcgtttttggcgggcttggttttgcg
acggtctttaccctgttcctgacaccggttctttaccttctgctggcgccgctggtttcg
gcccgtgccgatgggggcaagaaactgcaaagccagttgcgatctgcggaaagcattcct
gacaagggcgagattgaaggaagtaccagctag
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