Thermocaproicibacter melissae: NOG13_02440
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Entry
NOG13_02440 CDS
T09029
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tmel
Thermocaproicibacter melissae
Pathway
tmel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NOG13_02440 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmel03400
]
NOG13_02440 (nth)
Enzymes [BR:
tmel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NOG13_02440 (nth)
DNA repair and recombination proteins [BR:
tmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NOG13_02440 (nth)
Prokaryotic type
NOG13_02440 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WBY64583
LinkDB
All DBs
Position
complement(487867..488514)
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AA seq
215 aa
AA seq
DB search
MTKKQRAALAVQALKKEYPDAICSLNYKDPLQLLIATRLSAQCTDARVNLVTPALFKRFP
TLDAFCNGTQEEIEEYIHSCGLYKTKARDILAMCRMLKEKFNGVVPDTIEALTQLPGVGR
KTANLVVGDIYHKPAVVTDTHCIRICGRLGLSEGKDPAKVEKQLRAVLPPEESNDFCHRL
VLHGRAVCTARNPKCEKCCMNKFCKSSTVKDESTA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaagcaacgcgccgcactcgctgtgcaggcgttgaaaaaagaatatccggac
gccatttgttcccttaactacaaggacccgcttcagctgctgattgcaacccggctttcc
gcacaatgtacggacgctcgggttaacctcgttacccctgctctttttaagcggttcccg
acgcttgacgcattctgcaacggcacgcaggaagaaatcgaagaatacattcattcctgc
ggcctctacaagaccaaagctcgtgacattctggcaatgtgccgcatgctcaaagagaaa
ttcaacggtgttgttcccgacacaattgaggctttaacgcagcttccgggggtcgggcgc
aaaaccgccaaccttgttgtgggcgatatttaccacaagccggctgtggtaacggataca
cactgcatccgcatctgcggacggctcggcttgagcgaaggcaaagaccccgcaaaggtg
gaaaagcagcttcgcgcggttctcccgccggaggaatctaacgacttctgtcaccggctt
gttctgcacggaagggctgtttgtaccgcgcgaaacccgaaatgtgaaaaatgctgcatg
aacaaattctgcaaatcttccaccgtcaaagacgaatcaactgcataa
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