KEGG   Talaromyces marneffei: EYB26_004158
Entry
EYB26_004158      CDS       T06392                                 
Name
(RefSeq) uncharacterized protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
tmf  Talaromyces marneffei
Pathway
tmf03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tmf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    EYB26_004158
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmf03400]
    EYB26_004158
Enzymes [BR:tmf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     EYB26_004158
DNA repair and recombination proteins [BR:tmf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     EYB26_004158
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DUF5059
Other DBs
NCBI-GeneID: 79164131
NCBI-ProteinID: XP_054119427
LinkDB
Position
3:complement(join(1150991..1153433,1153487..1153755,1153885..1154292))
AA seq 1039 aa
MSQAENQILPGQEVTVEEIDNILQEVASRCRFSGPNVRRKYAAVDVDEVLGSLYRRLSSR
DAKWLTRMILKSYHPVQLPAEYFLKKVHFLLPHFLLFQDSLEAAVELLTSPSLKLFPPQP
QSDFANLLGDKALEHLIHIDITKGQDCIQIFSKSGKDSTLDRAGIHDVIKRSLAIGEPHC
KVSRRCILEGELLVWDDRDGKILEFHKLRKFLSRSDIFIGTELDSQPKPYEHLMIVFFDI
LLLDDDICISKPHRLRRLLLKETVKITPGRAEIFEQEIIDFSRLDAIRRLQQALARSIAE
RWEGYVIKACDEPYFSVLMSESADGFCRWIKLKKDYIPGLGDTVDFALIGARYDAKDAPI
LSTKPQLSWTHFFIGCLDNKEDVIRLSALPRFRIVDMIGARSLSVNDIQVLNQWGKFVAC
DVDSNSTFDCYSIHNSLPNMDIAFKTPFVVELLGSGFEKPSNAQYYTLRFPRVLKIHWDR
SFEDAISFVELQDLAAKARAVPADELEEENAVWFEKVAGTNRKTKYIVDKSQTTSTSSFT
CTSPLSKSPSLISLGLTPPSVNQAPASLIRGNMHNRRPFSQSSTTSSLNKCKRTASPVHP
LMALNSASNLNFTSPNLPHALRLKRLKLSATMEHSAIMDLDQAPQYSLRARGSPIPRAWA
SSVDSHSANPSSQPGQTPSGLGSGFTTPLRENSNFLSREISTRAAATFEEAWKFIEEAQA
GAEEKVEEESEEELEELEEELEPAAGLCHIPSPEHEPMDFEVYFGINPDDEAPVSTSVLR
NHPISPLSTVPIYCGESGFQEDSFRKAPREFIFSAKHFVKSLGFTHTRRRLRLSNPSAAI
NGMALGIVLVDIKDPSRVLAMQLYDMGNLLAAELSQPQPALPTQGKIFFLDSRILKAGGQ
GGIDNEMFTLNDWWSIYGTQYFYATISWREGGNAAQVVSGPRRIIDQINEHTTRASAPGG
RAAASIVNLYEPSEVEALGEFVSVNPTVHLDGDRYYRPYRPARHVPDGYAIHNGSYLPIP
RDVGQIDGSVSRYSSSAFV
NT seq 3120 nt   +upstreamnt  +downstreamnt
atgagccaagccgaaaaccaaatcctgcccggacaagaagtcaccgttgaggaaatagac
aatattcttcaagaagttgcctcacgttgccgattctccggtccgaatgtacgcaggaaa
tacgctgctgttgatgttgatgaagtgctgggatcgctgtatcgcagactgagcagtcga
gatgcgaaatggttgacacgcatgatcttgaagtcatatcatcccgtgcagctccctgca
gagtactttctcaaaaaagtacatttcctcttgcctcacttccttctgtttcaggactcc
cttgaagccgcggttgagcttttaacgtcgccttcacttaagctcttccctccgcaacca
caatcagacttcgccaacctcttgggcgacaaagccctagagcaccttatacacattgat
atcacgaagggacaggactgcattcagattttctctaaaagtggcaaagactcgactctc
gatagggctggtattcacgatgtcatcaaacgtagtctagcaattggcgaacctcattgc
aaggtttctcggcgctgtatcctggaaggagaactgcttgtttgggacgacagagatggc
aagatactagaatttcataaattgagaaagttcttgagtcgttcagacatattcattggt
acagaacttgattcacagcccaaaccatacgaacatctgatgattgttttcttcgatatc
ctgctactagacgatgacatttgcattagtaaaccccatagattacgaagattattgctc
aaagaaacagtcaaaattactcccggacgcgccgagatctttgaacaagagatcatcgac
ttttctcgtcttgatgcgatacgacgtcttcagcaagcactggcacggagtatcgctgaa
agatgggaaggttatgtcatcaaagcatgtgatgagccttacttttctgtcctaatgtca
gaaagtgctgatggcttttgtcgatggataaagctcaagaaagattatatacctggactt
ggcgatactgttgattttgccctgataggtgcacggtatgacgcgaaagatgctcctatt
ctatcaacgaagcctcaactctcttggacacacttcttcataggttgtcttgacaataag
gaagacgttattcgactgagtgctttgcctcgattccgcattgtcgatatgatcggcgcg
cgcagtctgagtgtgaatgacatacaagtgctcaatcagtggggcaaatttgttgcctgt
gacgttgattcaaacagcacgtttgactgctacagtatccacaactctttacccaatatg
gatattgcgttcaagactccgtttgtcgtagagttactgggcagcggctttgagaagcca
agcaacgcccagtattatacactgaggttccctcgagtcctgaagatccactgggatagg
tcgtttgaggatgccatctcattcgttgagttgcaagacctggcggcgaaagcacgtgct
gttcctgcagacgagttggaggaggagaatgccgtatggtttgagaaggtggctggcacc
aatagaaagactaagtatattgtagacaaatctcaaaccacctcaacatcatcattcaca
tgcacttctcctttgtccaaatcacccagtcttatctctctgggcttgacaccaccttct
gttaaccaggcaccagcctctttgattagaggtaacatgcataataggaggcctttcagt
cagtcatcaactactagctcacttaataaatgcaaacgcacagcatctcctgttcatcct
ctgatggccttgaactctgcgtcaaacttgaacttcacatcgccaaacttacctcatgca
ttgcgcttgaagcgtctcaaactatctgcaaccatggagcattctgcaatcatggatttg
gatcaagctcctcagtactctcttcgagcaagaggaagccccatcccacgggcttgggct
agcagcgtcgacagtcacagtgcaaatccttcatctcagcctggacagactcccagcggg
ctcggtagtggttttacaactcccttgagagagaattcaaatttcctatctcgtgaaatt
tcaactcgagcagcagctactttcgaagaggcatggaagttcatcgaagaggcacaagca
ggggcagaagaaaaggtagaagaggagtcagaagaggagttggaagaactggaagaagag
ctggaaccagccgcagggttgtgtcatataccgagtcctgaacacgaaccaatggatttc
gaagtatattttggaatcaatcctgacgacgaggcgcctgtgtctacaagcgttctgcga
aaccacccgatatctccactttccactgttccaatctattgtggtgaatcgggtttccaa
gaggattcttttcgcaaagctccacgtgaattcatattctctgcaaagcattttgtgaaa
tcactggggtttacacacacgcgtagaagacttcgcctgtctaatccatctgctgccata
aatggcatggctttgggcattgttttggtcgatatcaaagacccatccagagtcctcgct
atgcagctatacgatatgggtaacctgctggccgctgaactctctcagccacaacccgct
ctcccaactcagggaaagatcttctttcttgacagtcgcatcctcaaggctggaggtcag
ggtggaatcgacaacgaaatgttcaccttgaacgactggtggtccatatacggcacccaa
tacttctacgctacgatctcatggcgcgaaggtggcaacgcagcccaggttgtgtctgga
cctcgacgtatcattgatcaaatcaatgaacacactactagagcttctgcccctggcggt
cgtgcagctgcgagcatcgtcaatctttacgaacccagcgaagtcgaagccctcggcgag
ttcgtctctgtcaatcctacggtccatctagatggtgatcgttactatcgcccatatcgt
cctgctcggcacgttccagacggctatgccattcacaatggatcgtatctccccattcca
cgtgacgttggtcagattgatggctcggttagccgctattcgtcttcggcattcgtctaa

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