Talaromyces marneffei: EYB26_009648
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Entry
EYB26_009648 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tmf
Talaromyces marneffei
Pathway
tmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EYB26_009648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_009648
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
EYB26_009648
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
SMC_N
PduV-EutP
AAA_23
AAA_15
ORC-CDC6-like
AAA_25
DUF3584
RsgA_GTPase
AAA_28
AAA_22
AAA_14
DLIC
Arf
AAA_13
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
79169621
NCBI-ProteinID:
XP_054124870
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Position
8:complement(join(855378..856096,856156..856270))
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AA seq
277 aa
AA seq
DB search
MSPSINVQNLNYKFQDGSDGLKGVGLSLPSGSRTLLIGANGAGKTTLLRLLSGKKLAPTN
TIAIGGKDPFKDSLEGVTYLGVEWVLNSIVRTDIDVPTLLASVGGNAYPERRDELIDILD
IDLNWRMHAVSDGERRRVQLAMGLLRPWQILLLDEITVDLDLLSRYNFLSFLKRETETRE
CTIVYATHILDNLASWPTHLVHMHLGQVKQWGPMESFNETVPNRSAENSLLGDLVMHWLR
QDLQSRGPRNPHSGQGKTYPNVEGLGGYGLEKRPPKE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctcaatcaatgtgcagaatcttaattacaaattccaagatggatccgacggt
ctcaagggtgtagggctcagtcttccttcaggaagcagaacattacttattggagcaaac
ggtgccggcaaaacaaccctcctccgactgttatccggcaaaaaactagccccaaccaac
acaatcgcaatcggaggcaaagaccccttcaaagacagcctcgaaggcgtcacctatcta
ggcgttgaatgggtcctcaacagcattgtgcgtacggatattgatgtccccaccctcctc
gcctctgtgggcggaaatgcctatcctgagcgccgcgatgaattgatcgatatacttgac
attgatctcaactggcgcatgcacgctgtctcggacggtgagagacgtcgcgtgcaattg
gcaatgggcctattgcggccatggcagatcctgcttcttgatgagatcacagttgatctc
gatttgctgtcacgttataactttctctcgttcttgaaacgcgagactgagacgagagag
tgcactattgtctatgccacgcatatcctggataatcttgcgtcgtggccgacacatctg
gtgcacatgcacttgggacaggtgaagcaatggggtcccatggaaagcttcaatgagaca
gtccccaatcggtcggccgagaatagtctgttgggagatttggtgatgcattggctcagg
caggatctacagtctcgtgggccgcggaatcctcattccgggcagggaaagacgtaccct
aatgttgaggggcttgggggttatgggttggaaaagaggcctccaaaggaataa
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