Thiomicrospira microaerophila: JX580_08950
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Entry
JX580_08950 CDS
T08259
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh01501
beta-Lactam resistance
tmh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JX580_08950
01503 Cationic antimicrobial peptide (CAMP) resistance
JX580_08950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmh03036
]
JX580_08950
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmh02000
]
JX580_08950
01504 Antimicrobial resistance genes [BR:
tmh01504
]
JX580_08950
Chromosome and associated proteins [BR:
tmh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JX580_08950
Transporters [BR:
tmh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JX580_08950
Antimicrobial resistance genes [BR:
tmh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JX580_08950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
PYNP_C
Biotin_lipoyl
PapC_N
Motif
Other DBs
NCBI-ProteinID:
UQB41791
LinkDB
All DBs
Position
complement(1845008..1846069)
Genome browser
AA seq
353 aa
AA seq
DB search
MFKHLSRVWLLVSLPFFAFANPNAQQVIVGQVTGETIVETINALGTLSARESVALSVSVT
ERVSSLHFQDGEQVKKGQVLLRLFSEEERASLAELKVATQDAQRQYDRFVPLFQRGDVAQ
SVLDERKRDWDLAKAREAVMQAKLDKLTLVAPFSGQVGLRQVSEGALLTPGTVVTDLKDL
SQMKLDFTVPSRFLTELATGLNVRAETDAYPQQAFTGQIETILPQIDPVTRSVQVRANLD
NAKGLLMPGMLMKVTLQQQPRSVLFIPETAIVPIAERQFVYKLNPDENGLYKLQRVQVQL
GMRQPGLVEVVSGLKLGDKVVSEGALRVRPGQLVRALERLERKSDMADQEAGL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacatctctcaagggtttggttgcttgtcagtttaccgttctttgcttttgcc
aatccgaatgcgcagcaggttattgtcggtcaggttaccggcgagacgattgtcgaaacg
attaatgctttaggcacactatcggcgcgtgagtcggttgcgctgagtgtcagtgtcact
gaacgggtgagttcattgcattttcaggatggcgaacaggtcaaaaaaggccaggtgttg
ttacgtttgtttagcgaagaagaacgcgccagtctggctgagttgaaagtggctacgcag
gatgcgcagcgccaatatgaccgctttgtacctttgtttcaacgtggcgatgtggcgcag
tcggtgttggatgaacgtaagcgcgactgggatctagccaaggcgcgcgaagcggtgatg
caggccaagcttgataagttaacgctggtggcaccattttccggtcaggtgggtttgcgt
caagtcagtgagggtgcgttattaacccccggtacggtagttaccgacctgaaagacctg
tcgcaaatgaaactcgattttaccgtgccgagtcggtttttaactgagctggcaacaggc
ctgaatgttcgtgcagaaactgacgcctatcctcagcaggcattcactgggcaaatcgaa
actatcctaccgcagattgatcctgtaacacgcagtgtacaggttcgtgccaacttagat
aatgcaaaaggcttgttaatgccgggcatgttaatgaaggtgaccttacagcaacaaccc
cgttcggtgttgtttattccagaaaccgcgattgtgccgattgccgaacgtcaatttgtt
tataaactcaaccccgatgaaaacggcttgtataaattgcagcgtgtacaggtccaactg
ggcatgcggcaaccaggcctggttgaagtggtttcaggtttaaagctaggcgataaggtg
gtgagcgagggggcgctaagagtcaggccggggcagttagtcagagccttggaacgcctt
gagcgtaaatcggatatggcggatcaggaagcaggcttatga
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