Thermotoga maritima MSB8: THEMA_04305 Help Entry THEMA_04305       CDS       T02976                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism tmi  Thermotoga maritima MSB8 Pathway tmi03030   DNA replication tmi03410   Base excision repair tmi03420   Nucleotide excision repair tmi03430   Mismatch repair Brite KEGG Orthology (KO) [BR:tmi00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     THEMA_04305    03410 Base excision repair     THEMA_04305    03420 Nucleotide excision repair     THEMA_04305    03430 Mismatch repair     THEMA_04305  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tmi03032]     THEMA_04305    03400 DNA repair and recombination proteins [BR:tmi03400]     THEMA_04305 Enzymes [BR:tmi01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      THEMA_04305 DNA replication proteins [BR:tmi03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      THEMA_04305 DNA repair and recombination proteins [BR:tmi03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      THEMA_04305    NER (nucleotide excision repair)     GGR (global genome repair) factors      THEMA_04305    MMR (mismatch excision repair)     DNA ligase      THEMA_04305   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       THEMA_04305 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD HHH PTCB-BRCT HHH_8 HHH_3 5_3_exonuc RNA_ligase BRCT_2 RUBY_RBDX UPF0758_N UBA_3 Motif Other DBs NCBI-ProteinID:  AHD18131 LinkDB All DBs Position 840429..842495 Genome browser AA seq 688 aa AA seqDB search MSERKIPKEVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVT PDSPTQRVGGKVLEGFKTVKHSVPMLSLDNTYNEEEILEFDRRVKKALQEAEVEYVAELK IDGVSIALRYENGRFVLGATRGDGIEGEDVSENVKTVRSIPLRLRKPVTIEVRGEIYMPV DEFKRLNDEREEEGLPPFANPRNAAAGTLRQLNTALVAARRLDSFIYYVVHPENYGLKTQ WEALQFLKELGFKVNPHSRLCKNIQEVIDYWKEWKERKRELDYWVDGVVVKVNRFDFQRI LGETSKAPRWAIAFKFPAEQARTRVLDVTIQVGRTGVLTPVAELEPVQLAGTIVKRASLH NFEYIREKDIRIGDYVFVEKAGGIIPQIVKSIPELRTGNEKEIKPPDKCPVCGGKVGKLN PDEVAIRCLNPHCPAKLKRALRTLVSREALDIEGLGEKLIDRLVDAGLIKDIADIFYLTP FDLAQLGPGIGQRTIAKILQEIEEAKKRPLHKLITGLGIPMVGQKTAKILAEHFKSLEAI ADASYETLKDIPGIGPEIAKSIVEYFRNPKTREIIEKLKKAGVKLEEKVVKLDILRGLTF AVTGTLKNFTREEIIEFLEKLGAKVVNSVSRNTDYLIVGENPGSKYERAKMLKVKMMSEE EFLEFVRKRAELKGYNFDEIMRSWKEWS NT seq 2067 nt NT seq  +upstreamnt  +downstreamnt atgagtgagagaaagatcccaaaggaagtaattgaagaagtggaaaggctcagagaggag atcgagtatcacaactacagatactacgttttgaacgatccagttattacggacgaagag tacgatagactcatgagaaggctcattgaactggaaaggatgtatccagaactggttaca ccggattcgccaactcagagggtagggggaaaggtactcgaaggttttaaaacggtaaag cattccgttcctatgttgagtctggataacacgtacaacgaagaagagattctcgaattc gatcggcgtgttaaaaaagctcttcaggaggcagaagtcgagtacgttgccgagctgaag atagacggcgtttccatagctcttagatatgagaacggaaggttcgttctgggagcgaca cgaggagatggaatagaaggagaagacgtctccgagaatgtgaaaaccgtacgcagtatt ccacttcgtctgagaaagcccgtcaccatagaagtgagaggggaaatatacatgcctgtg gatgaattcaaaagattgaacgatgaaagagaagaagaaggacttcctccctttgccaac ccaaggaatgccgctgcaggaacgcttcggcagttgaacacggctcttgttgcggcaagg cgtctggattcgttcatttactatgtggttcatcctgaaaactacggtctgaaaacacaa tgggaagctcttcagtttctgaaagaactcggtttcaaggtgaatccacactccagactg tgcaaaaacattcaggaagtgatcgattactggaaggaatggaaagaaagaaaaagggag ctggattattgggttgatggcgttgtggtgaaggtgaacagattcgatttccagagaatt ctcggtgagacatcgaaagcaccacgatgggctatcgcgttcaagtttcctgctgagcag gcaagaactagggtgctggatgtcaccatccaggttggaagaacaggtgttctcacaccc gttgccgagctcgaacccgttcagctcgctggaacgatcgtgaagagagcttcactgcac aatttcgagtacataagagaaaaagatatcagaataggagactacgtctttgtggaaaaa gccggtggaatcattcctcagatagtcaaatcgataccagaattgagaactggcaacgaa aaggaaataaaaccacccgataagtgccctgtctgtggtgggaaagtaggaaagttgaat cccgacgaggttgctatcaggtgtctaaacccgcattgtcctgctaaactgaagagagct ttgaggactctggtttccagagaggctctcgatattgaaggactcggggagaagctgata gacagactagtcgatgctggtctcataaaggatatagcagatatcttctaccttactcct ttcgatctcgctcagcttggaccggggatcggtcagcgaacgatagcgaagattctccaa gagatagaagaggcgaagaagagaccgcttcacaaactgataacgggtcttggaattccc atggtaggtcagaagacggcaaagattctcgcggagcatttcaaatccctggaagcaatt gcagatgcttcttatgaaacactaaaggacataccgggaatcggtccagaaatcgcaaag agcatcgttgagtacttccgaaatccaaaaacaagggaaatcattgaaaaactcaaaaaa gccggagtgaagctcgaagagaaagttgtgaaactcgatatcctgaggggattgactttc gccgtgacaggtaccttgaagaactttacaagggaagaaataatagagttcctcgagaag ctgggagcaaaagtcgtcaactctgtgagcaggaacacggattatctcatagtgggtgaa aatcccggctccaagtacgaaagagcgaagatgttgaaagtaaaaatgatgagtgaggaa gaattcctcgagtttgtcagaaaaagagcagaattgaagggatacaacttcgacgagata atgaggagttggaaggaatggagttga

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