Tuber melanosporum: GSTUM_00001678001
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Entry
GSTUM_00001678001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K07936
GTP-binding nuclear protein Ran
Organism
tml
Tuber melanosporum
Pathway
tml03008
Ribosome biogenesis in eukaryotes
tml03013
Nucleocytoplasmic transport
tml03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00001678001
03008 Ribosome biogenesis in eukaryotes
GSTUM_00001678001
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GSTUM_00001678001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00001678001
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00001678001
03016 Transfer RNA biogenesis [BR:
tml03016
]
GSTUM_00001678001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00001678001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tml04147
]
GSTUM_00001678001
04031 GTP-binding proteins [BR:
tml04031
]
GSTUM_00001678001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GSTUM_00001678001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
GSTUM_00001678001
Pre-60S particles
GSTUM_00001678001
Transfer RNA biogenesis [BR:
tml03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
GSTUM_00001678001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
GSTUM_00001678001
Spindle formation proteins
GSTUM_00001678001
Exosome [BR:
tml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GSTUM_00001678001
GTP-binding proteins [BR:
tml04031
]
Small (monomeric) G-proteins
Ran Family
Ran
GSTUM_00001678001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
G-alpha
MMR_HSR1
Gtr1_RagA
RNA_helicase
Pox_A32
ArgoMid
AAA_7
AAA_24
TsaE
AAA_16
AAA_33
DUF5906
Motif
Other DBs
NCBI-GeneID:
9187720
NCBI-ProteinID:
XP_002835892
INRA:
GSTUM_00001678001
UniProt:
D5G6A6
LinkDB
All DBs
AA seq
216 aa
AA seq
DB search
MTTQTQVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLGFFTNFGELKF
DVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLTG
NKVDVKERKVKTKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPTLDFVASPA
LAPPEVTVDTEVLAAYQREMEDAALHPLPDEDDADL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcaaactcaggttccgaccttcaagctcgtgcttgtcggtgatggtggtacc
ggaaagactaccttcgtcaagcgtcacttgactggtgagtttgaaaaaaaatatatcgcc
actcttggtgtcgaggtccaccctcttggctttttcaccaacttcggtgaactcaagttc
gatgtttgggataccgctggtcaggagaagtttggtgggctgagagatgggtactacatc
aatggtcaatgcggtattatcatgttcgacgtcacttctagaattacctacaagaacgtt
cccaactggcatcgtgatctcgttcgcgtttgcgagaacattcctatcgttcttacggga
aataaggtcgacgttaaggagcgcaaggttaagaccaaggccattactttccatcgcaag
aagaatcttcaatactacgatatctctgccaagtcgaactacaactttgaaaagcctttc
ttgtggttggccaggaagctcgttggaaacccgactcttgacttcgttgcttccccagct
ttggctccccctgaggtcactgtcgataccgaggtgttggcagcctaccagcgggagatg
gaggatgctgctctgcaccctcttcccgacgaagatgatgcggatttgtaa
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