KEGG   Tuber melanosporum: GSTUM_00001678001
Entry
GSTUM_00001678001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K07936  GTP-binding nuclear protein Ran
Organism
tml  Tuber melanosporum
Pathway
tml03008  Ribosome biogenesis in eukaryotes
tml03013  Nucleocytoplasmic transport
tml03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00001678001
   03008 Ribosome biogenesis in eukaryotes
    GSTUM_00001678001
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    GSTUM_00001678001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00001678001
   03009 Ribosome biogenesis [BR:tml03009]
    GSTUM_00001678001
   03016 Transfer RNA biogenesis [BR:tml03016]
    GSTUM_00001678001
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00001678001
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tml04147]
    GSTUM_00001678001
   04031 GTP-binding proteins [BR:tml04031]
    GSTUM_00001678001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     GSTUM_00001678001
Ribosome biogenesis [BR:tml03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    GSTUM_00001678001
  Pre-60S particles
    GSTUM_00001678001
Transfer RNA biogenesis [BR:tml03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    GSTUM_00001678001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     GSTUM_00001678001
   Spindle formation proteins
    GSTUM_00001678001
Exosome [BR:tml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   GSTUM_00001678001
GTP-binding proteins [BR:tml04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    GSTUM_00001678001
SSDB
Motif
Pfam: Ras Roc Arf G-alpha MMR_HSR1 Gtr1_RagA RNA_helicase Pox_A32 ArgoMid AAA_7 AAA_24 TsaE AAA_16 AAA_33 DUF5906
Other DBs
NCBI-GeneID: 9187720
NCBI-ProteinID: XP_002835892
INRA: GSTUM_00001678001
UniProt: D5G6A6
LinkDB
AA seq 216 aa
MTTQTQVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLGFFTNFGELKF
DVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLTG
NKVDVKERKVKTKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPTLDFVASPA
LAPPEVTVDTEVLAAYQREMEDAALHPLPDEDDADL
NT seq 651 nt   +upstreamnt  +downstreamnt
atgaccactcaaactcaggttccgaccttcaagctcgtgcttgtcggtgatggtggtacc
ggaaagactaccttcgtcaagcgtcacttgactggtgagtttgaaaaaaaatatatcgcc
actcttggtgtcgaggtccaccctcttggctttttcaccaacttcggtgaactcaagttc
gatgtttgggataccgctggtcaggagaagtttggtgggctgagagatgggtactacatc
aatggtcaatgcggtattatcatgttcgacgtcacttctagaattacctacaagaacgtt
cccaactggcatcgtgatctcgttcgcgtttgcgagaacattcctatcgttcttacggga
aataaggtcgacgttaaggagcgcaaggttaagaccaaggccattactttccatcgcaag
aagaatcttcaatactacgatatctctgccaagtcgaactacaactttgaaaagcctttc
ttgtggttggccaggaagctcgttggaaacccgactcttgacttcgttgcttccccagct
ttggctccccctgaggtcactgtcgataccgaggtgttggcagcctaccagcgggagatg
gaggatgctgctctgcaccctcttcccgacgaagatgatgcggatttgtaa

DBGET integrated database retrieval system