Tuber melanosporum: GSTUM_00005330001
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Entry
GSTUM_00005330001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
tml
Tuber melanosporum
Pathway
tml00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GSTUM_00005330001
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tml01007
]
GSTUM_00005330001
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tml03016
]
GSTUM_00005330001
Enzymes [BR:
tml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
GSTUM_00005330001
Amino acid related enzymes [BR:
tml01007
]
Aminoacyl-tRNA synthetase
Class I (U)
GSTUM_00005330001
Transfer RNA biogenesis [BR:
tml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GSTUM_00005330001
Prokaryotic type
Other AARSs
GSTUM_00005330001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
Motif
Other DBs
NCBI-GeneID:
9187821
NCBI-ProteinID:
XP_002837462
INRA:
GSTUM_00005330001
UniProt:
D5GAW0
LinkDB
All DBs
AA seq
1075 aa
AA seq
DB search
MDFPKEEERILEFWREIDAFRTSVKLSEGRPPYSFYDGPPFCTGLPHYGHLLASTIKDIV
PRYWHMKGHYVERRFGWDTHGLPIEHEIDKRLGITSKEDVLKMGMEKYNEECKAIVMRYS
TEWRQTIDRLGRWIDFDNDYKSMYPTFMESIWWVCKQLFVKDQVYLGYRVMPYSTACTTP
LSNFEAQQNYKDVQDPAVVVTFPLLDDPTTELLAWTTTPWTLPSHTGIAVHPDFEYIKIS
DRASGRNYILLESCLKTLYGEKGLKKAKYTILEKIKGKDMLGWKYEPLFDYFYEQFKDYG
FKVLNATYVTSDSGTGLVHQAPAFGEEDYSVAMEAGVINETRPPPNPVNEAGIFTSEVRE
FAGLHVKAADKGIIKHLKEKKRLIVDSQITHSYPFCWRSDTPLIYRAVPAWFVRIPNIIP
KMLENIEGSHWVPTNVKENRFGNWIQNARDWNISRNRYWGTPIPIWMSDDKEEMVCIGSV
EELRELSGCGEIPDLHRDKIDHITIPSKKGKGVLRRVEEVFDCWFESGSMPYASSHYPFE
NKDQFEKAFPADFIAEGLDQTRGWFYTLLVLGTHLFGVSPFQNCIVNGIVLAEDGKKMSK
RLKNYPDPTLVMDKYGSDALRLYLINSPVVRAMPLRFKEVGVKDVVTKVLLPLWNSYNFF
EQQSQLLKKLEGVDFIFNPESGGSKNVMDRWILANCQSYLKFVNQEMKGYRLYTVVGRML
EMVDNTTNWYIRFNRKRLKGEYGTEDTLHALNSLFEVLFTLVRGMAPFAPFLTDNIYHRL
KPHIPDSMLPEDARSVHFLSFPEVREELFDEEVERRFGRMQRVIELARTSRERKAIGLKT
PLKTLVVIHPDQTYLDDVKSLESYITSELNVRDLVLSADEEKYGVQYKVTADWPVLGKKL
KKDLIKVKNALPSITSAEVKGFVQEKKIVVGGITLIEEDLVVSRGLSGSDTSQDFETNTD
NDVLTILDTVLHKDLRNEGLAREIVNRVQRLRKKAGLLPTDDIKMEYKVLQDPIGLEEVF
LEHADTFEKALRRPLDKATITQVGEVQPGENLDKMILEETQEVGEATFMLRLLKL
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggatttcccaaaagaagaggagaggatccttgagttttggagggagattgatgccttc
agaacttccgttaagctatcagaaggaaggccaccctactcgttttacgatggccctcca
ttctgtactggtcttccacattacggacatctcctcgcgagcactatcaaagatatcgtt
cctcgatactggcatatgaaaggccactatgtcgagcggcggtttggatgggatacccac
ggcttgccaattgaacacgaaatcgacaaaaggcttggtattacgtcgaaagaggatgtc
cttaaaatgggaatggaaaaatacaacgaggagtgcaaagctatcgtcatgagatactct
accgagtggaggcaaaccattgacaggttaggtcggtggattgatttcgacaacgattac
aagagcatgtacccaacatttatggaatcaatatggtgggtctgtaagcaactctttgtg
aaagaccaggtatatctaggatatagggttatgccatattctaccgcttgcacaacaccc
ctttcgaatttcgaagctcagcagaactacaaagatgtccaggaccctgcggttgtagtt
actttcccgcttttggatgacccgactacagagctacttgcctggacgacgactccttgg
actctcccttcacataccggaattgcggttcatccggatttcgagtacatcaagattagt
gatcgagcttctggcagaaattacatccttctcgagtcgtgtcttaagacattatacgga
gagaaggggttgaaaaaggcgaaatacaccatcttggagaagatcaaagggaaggacatg
ctagggtggaaatatgaacctctgtttgactacttttacgaacaattcaaggattacgga
ttcaaggttttgaacgcaacatatgttacgtcagatagcggaacaggactagtacatcag
gcacccgctttcggcgaggaggactactcggtcgccatggaagcgggcgttatcaatgag
acaagacctcctccgaaccctgtcaacgaggctggtattttcacaagtgaagtccgagaa
tttgccggacttcatgtaaaggccgcagataaggggatcatcaagcatctcaaggaaaag
aagcgacttattgtagacagccaaattacccatagttatcctttttgttggcgttctgac
acccccttaatttaccgtgctgtacctgcctggttcgtccgcatccctaatatcattccc
aagatgctggaaaacatcgagggctcgcattgggtgccgacaaacgtcaaagaaaacaga
ttcggtaactggattcaaaatgcaagagactggaacatctctcgtaaccgttactggggc
acacccattcctatctggatgtctgatgacaaagaagagatggtgtgtatcggaagtgtc
gaagaattgagggaactcagtggctgtggggaaatcccggatcttcacagggataagatt
gatcacattaccattcccagtaagaaagggaaaggtgttctgcgaagagttgaggaggtt
tttgattgttggtttgagtcaggaagcatgccatatgccagtagccactacccgtttgag
aacaaagatcagtttgaaaaggcttttccagcagacttcattgcggaggggttggatcaa
acacgtggctggttttatactctccttgttctcggtacccatctctttggcgtatcgccg
ttccagaattgtatagtcaatggtatcgtgttggctgaagatggcaagaagatgtccaaa
cgtctcaagaattacccagacccgacactggttatggataagtatgggtcagacgccctc
cgactttaccttatcaattcgcctgtcgtcagggctatgccactgagatttaaggaagtt
ggtgttaaagacgttgttaccaaagtcttattgccactatggaatagttataacttcttt
gagcagcagtcccagcttctgaagaagctcgaaggtgttgacttcatattcaatcccgag
tcaggtgggagcaagaacgttatggataggtggattctagccaattgccagagctatctc
aaattcgtgaaccaagagatgaagggttaccgactttacactgttgttgggagaatgctt
gagatggtcgataatactacaaattggtatatccggttcaacaggaagcgtctcaagggc
gagtacggaacagaggacactttgcatgccttgaattccctctttgaggttcttttcact
cttgtccgcggaatggctccatttgcaccgttcctcacagacaacatctaccaccgtctc
aagccccacatccccgactccatgttgcctgaagatgcacgaagtgtgcatttcttaagt
ttcccagaggttcgggaggagctatttgacgaggaggttgaacggagattcggaaggatg
caaagggttatcgaactagctcgtacatcgagagagcgaaaggcaattgggcttaagaca
cctttgaaaacacttgttgtcatccatcccgaccagacatatcttgatgatgtcaaatct
ctagagtcttatattacctctgagctaaacgtccgagatttggtcctctcagcagacgag
gagaagtacggcgtccagtacaaggtcaccgcagactggcccgttctcggaaagaagcta
aagaaggacctcattaaggtcaagaacgcacttccttccattaccagcgcggaggtcaag
gggtttgtccaagaaaagaagattgttgttgggggcatcacacttatcgaggaggacctc
gtcgtcagtcgtggcctcagcggctccgacacatctcaggacttcgaaacaaacaccgac
aacgacgtcctcaccatcctggacacagtcctccacaaagacctccggaatgaaggcctt
gccagagagattgtcaaccgtgtacagagacttaggaagaaggctggcctccttccaacc
gatgacatcaagatggagtacaaggtccttcaagacccgatcgggctagaagaggtgttc
ctcgagcacgccgacacttttgagaaagctcttcgcagacccctggataaggctaccatc
acccaagttggcgaggtccaacccggggagaatctagataagatgattctggaggaaact
caggaggtcggggaggctaccttcatgcttaggttgcttaagctttag
DBGET
integrated database retrieval system
