Phaeoacremonium minimum: UCRPA7_3758
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Entry
UCRPA7_3758 CDS
T03102
Name
(RefSeq) putative 116 kda u5 small nuclear ribonucleoprotein component protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRPA7_3758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmn03041
]
UCRPA7_3758
Spliceosome [BR:
tmn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
UCRPA7_3758
Complex C
U5 SnRNP specific factors
UCRPA7_3758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Motif
Other DBs
NCBI-GeneID:
19324137
NCBI-ProteinID:
XP_007914389
UniProt:
R8BMW9
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MDDLYDEFGNFIGEEPEASEEESEHGIDAGNYVYDDEYPEEAPEGRGQELMEIDDDGPSN
AIVLHEDKQYYPTAEQVYGEGVETMVQEEDAQPLSEPIIAPVEQKKFTVEEADLPPVFFD
RNFMTDLMNFPEQIRNVALAGHLHHGKTAFMDMLVLETHDITDRLEKRTGKNRDEQLRYT
DVHVLERERGLSVKAAPMSLVLQGTKGKSHLVNIIDTPGHVNFVDEVASALRLVDGVCLV
VDVVEGVQVNTEQIIKHAVLENIPLTLIVNKMDRLILELKLPPSDAYFKLKHVIEEVNTI
IENTIPGKGEERRLSPEKGNVLFACTDMGWCFTLQSFAKMYSDSFGGVNIEEFSRRLWGD
IYYNPKKRSFTRKPIEERAKRSFVNFVMEPIYKLYSHTISESPEDLKDTLESLGISLKPS
QYKMDAKVILKLVCEQFFGPSTAFVDMVVQHVPSPVEAAEKMLQQHFTGPLDTKVAESIK
ACDQNGPLVIHATKLFNAPDAKSFYTFGRVLSGIARPGTEVRVLGEGYSIDDEEDMAMAR
ISDVWIAETRYNIPTDGVPAGNWVLLGGIDNSIVKTATIVDKRFEDDEDAYIFKPIMHFT
ESVLKVAVEPINPSELPKMLDGIRKINKSYPLITTKVEESGEHIILGTGELYMDCVLHDL
RRLYADMEIKVSDPVTRFCETVVEQSATKCYAITPNKKNRITMVAEPLEDGIAQDIESGA
VRIRDPIRKTAKFFEEKHGWDLLAARSIWAFGPDEMGPNILQDDTLPGEVDKKLLNTVKE
SIRQGFSWATREGPLCEEPIRNTKFKITDISLAPEAIFRGGGQVIPTSRRACYSSFLMAS
PRLMEPMYSVSMTGPQDAVSSVYTFLARRRGHVLSDGPIVGTPLYRVNGLIPVIDSFGFE
TDLRINTQGAAMLSLVFDRWNIVPGDPLDREIVIRPLQPASAQATARDFVLKTRRRKGLS
EDVSVAKFLEPEFYNSLMESGTLGEP
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctctatgatgagttcggtaattttattggcgaggagcccgaagcatcagag
gaagagtccgaacatggcattgatgcgggaaactacgtctacgatgacgagtatcccgag
gaggctcccgagggccgaggccaggagctcatggagatagatgatgatggaccgtcaaat
gcgatcgtgctccacgaggacaagcaatactaccccacggctgagcaggtgtacggagag
ggcgtcgagacgatggtgcaggaggaagatgcgcagcccctctccgaacccatcatcgct
cccgtcgagcagaagaagttcaccgtcgaggaagcagacctacccccggtgttcttcgat
cgcaacttcatgacagacctcatgaacttccccgagcaaatacgaaatgtcgcgctagct
ggacatctccaccatggaaagacagcgtttatggacatgcttgtcctggagacacacgac
atcacggacagactcgagaagcgcacaggcaagaatcgcgacgagcagctcaggtacacc
gatgtacacgtcctggagagggaacgagggctttcagtaaaggcggcgccaatgagtctg
gttctgcagggcaccaagggcaaatctcacctggtgaacatcatcgatacccctggccac
gtcaattttgttgatgaggtcgcatctgcccttaggcttgttgacggcgtctgtctcgtg
gtcgatgtggtcgagggcgtccaggtgaacactgagcagatcatcaaacatgccgttcta
gaaaatatcccattgaccctcattgtcaacaagatggatcggctgatcttggagctgaaa
ctacccccaagcgatgcttatttcaagctgaaacatgtcattgaggaagtcaacacaatc
atcgaaaataccattcccggcaagggtgaagagaggcggttgagcccagaaaagggcaat
gttcttttcgcatgcacagacatgggatggtgcttcacactacaatcctttgcaaagatg
tactcggacagttttggaggcgtcaacatcgaagagttttcccgtcgcttgtggggtgac
atctactacaaccccaaaaaacgctcattcacaaggaaaccgattgaggagcgcgcaaag
cgctcgttcgtcaacttcgtgatggagcctatctacaagctctactcccatactatcagc
gagagcccagaagatctcaaagacacactcgaatcactaggcatttcgttaaagccttca
cagtataagatggacgccaaggtcatcttgaagcttgtatgcgagcagttcttcggacct
tcgaccgcatttgtcgatatggtggttcagcatgtcccttctccggttgaagctgctgag
aagatgctacaacagcattttactggccctttagacacaaaggttgccgagtccattaag
gcctgcgatcagaacggaccgttggtaattcatgcgacaaagctgttcaatgcccccgat
gcaaagagcttttatacctttggccgcgtgctaagcggtattgcccgcccaggcaccgag
gtgcgagttctcggcgaaggatactcaatagacgacgaggaagatatggccatggccagg
atatcagacgtctggatcgcggaaacaagatacaacatccctacagacggcgttcctgca
ggtaactgggtgttacttggaggtattgacaactcgattgttaagacagctactatcgtg
gacaaacggttcgaagatgatgaagatgcgtacatcttcaagccaatcatgcatttcaca
gaatctgttctaaaagttgcagtcgagcccatcaacccctcagaactccccaagatgctg
gatggtatccggaaaatcaacaagagctatcctctgatcaccaccaaggttgaagagtct
ggggagcatatcatcctgggcactggcgagctctatatggattgtgttctccatgatctg
cgaagattatacgcagatatggagatcaaggtctccgaccctgtcacgcgattctgtgag
actgttgttgagcagtccgcgaccaaatgctacgctatcacgccgaacaagaagaacaga
attaccatggttgcagagccgttggaagacggcattgcacaggatattgagtctggcgct
gtgaggataagagatccgatacggaaaaccgccaagttttttgaagaaaagcacggctgg
gatttgcttgcggctcgaagcatatgggccttcggtccggacgagatgggaccgaatatt
ctacaggacgatacgcttcctggcgaggtcgacaagaaactcctgaacaccgtcaaagag
tctatccgccaaggatttagttgggcaaccagagaaggccccctgtgtgaagaaccaata
cgcaataccaagttcaagatcaccgacatatcattggccccggaagcgatattccggggc
ggcggtcaagtcatccccacatcccggcgcgcctgctacagctccttcctcatggcatcc
ccgcgcctgatggagcccatgtactcagtatcgatgaccgggccccaggacgccgtgtcg
tccgtgtacactttcctggcccgccgccgagggcacgtcctctcggacggccccatcgtc
ggcacgccgctctaccgcgtcaacgggctgatccccgtgatcgactcgttcggcttcgag
acggacctccgcatcaacacgcagggcgccgccatgctgtccctcgtctttgaccgctgg
aacatcgtgcccggcgacccgctcgacagggagattgtcatccggcccctccagcccgcc
agcgcccaggccacggcgcgcgactttgtgctcaagacgcgccgcaggaagggcctgagc
gaggacgtcagcgtcgccaagttcctggagcccgagttttacaacagcctcatggagagc
gggaccctgggcgagccttga
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