Phaeoacremonium minimum: UCRPA7_7868
Help
Entry
UCRPA7_7868 CDS
T03102
Name
(RefSeq) putative ccr4-not complex subunit caf16 protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRPA7_7868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_7868
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
UCRPA7_7868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_28
AAA_23
DUF3584
AAA_15
AAA_16
AAA_22
AAA
AAA_25
PduV-EutP
ORC-CDC6-like
Arf
AAA_14
nSTAND3
SRP54
NACHT
RsgA_GTPase
AAA_13
Motif
Other DBs
NCBI-GeneID:
19328664
NCBI-ProteinID:
XP_007918580
UniProt:
R8BBK4
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MSAPHPLPPSINVNDLTYHFPDMSTGVSHISLNVPPRSRTLLIGANGAGKTTLLRLLAGK
RLAPGGAIKISGVDPFTDGLEGVTYLGLEWVLNPIVRTDIGVSELLRSVGGDAYPERRDE
LVGVLDIDTNWRMHAVSDGERRRVQLAMGLVRPWTVLLLDEITVDLDVWSRAQFLGWLRA
ETESRDCTIVYATHILDNLAGWPTHLVHMHLGTVREWGPAESFLSRLEGEASGNSRLGEL
VLGWLRDDLKDRGPRSQHKRGPEGKSYAHLTGVGGYGDESTKGPPPKD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacctcacccactcccgccatccatcaacgtcaatgatctgacatatcacttc
ccggacatgtcgaccggcgtgtcgcacatatccctgaacgtgccgccgcggtctcgcacg
ctgctcataggcgccaatggcgctggcaagaccactctcctgcgactgctggcgggcaag
cgccttgcgcctggtggcgccatcaagatctcgggcgtggacccgttcaccgacgggctc
gagggcgtgacgtacctggggctggagtgggtgctgaacccgatcgtgcggacagacatt
ggcgtctcggaactgctgcggtctgtcggcggcgacgcctacccggagaggagagacgag
ctggtcggcgtgctcgacatcgacacgaactggcgcatgcacgccgtgtcggacggcgag
cgccgccgcgtgcagctggccatgggcctcgtgcggccgtggacggtgctgctgctggac
gagatcaccgttgatctggatgtgtggagccgtgcgcagtttctgggctggctgcgcgcc
gagaccgagtctcgtgattgcacgatcgtctacgctactcacatcttagacaatctggct
ggctggccgacgcatctcgtccacatgcatctgggcacggtgcgggaatggggccccgcg
gagagcttcctgagtaggctcgagggcgaggcgagcggcaactccaggctgggcgagctt
gtgctgggctggttgcgggacgacctgaaggaccgtggaccgagaagccagcataaacgc
ggtccggaggggaagagctatgcccatctgactggtgttgggggttatggtgacgagtct
accaaaggtcctcctccaaaggactag
DBGET
integrated database retrieval system
