Tistrella mobilis: TMO_d0019
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Entry
TMO_d0019 CDS
T02128
Symbol
ygcF
Name
(GenBank) 7-carboxy-7-deazaguanine synthase-like protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
tmo
Tistrella mobilis
Pathway
tmo00790
Folate biosynthesis
tmo01100
Metabolic pathways
Module
tmo_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
TMO_d0019 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmo03016
]
TMO_d0019 (ygcF)
Enzymes [BR:
tmo01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
TMO_d0019 (ygcF)
Transfer RNA biogenesis [BR:
tmo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
TMO_d0019 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
zf-WIZ
Motif
Other DBs
NCBI-ProteinID:
AFK57571
UniProt:
I3TXT3
LinkDB
All DBs
Position
pTM4:22800..23543
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AA seq
247 aa
AA seq
DB search
MVDRGGRMCFNSAHGQPESPARDPEDRIADARSNEDKMSYTVKELFLTLQGEGAQAGRTA
VFCRFAGCNLWSGRERDRAGALCRFCDTDFVGTDGDGGGRFRDAQDLAAAIEGCWGGGRA
RRYVVFTGGEPLLQLDEALIHAVKARGFEIAVETNGTIAAPEGIDWICVSPKAGTELVQR
RGHELKLVHPQAGLDPAALEALDFGVMWVQPMDGPDRAVNTEAAVAWCLAHPRWRLSLQT
HKLIGIP
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggtggaccgcgggggccggatgtgcttcaactccgcccatgggcagccggagtcaccg
gcgcgcgatccagaggatcgcatcgctgacgcccgcagcaacgaggacaagatgagttac
acggtcaaggagctgttcctgaccctgcagggcgaaggcgcacaggcgggtcggaccgcc
gtgttctgccgcttcgcggggtgcaatctgtggtcggggcgggaacgggacagggcaggg
gccctctgccggttctgcgacaccgatttcgtgggaaccgacggcgacgggggcggacgc
ttccgcgacgcacaggatctggcggcggccatcgagggctgctggggcggcggccgggcg
cgccgctatgtcgtcttcaccggcggcgagccgctgctgcagctggacgaggcgctgatc
cacgcggtcaaggcccggggtttcgagatcgcggtggagaccaacggcaccatcgcggcc
cccgagggcatcgactggatctgcgtcagtcccaaggcgggaaccgagctggttcagcgc
cgcggccacgagctgaagctggtccacccgcaggcggggctcgatcccgccgcgctggaa
gcgctcgatttcggggtgatgtgggtgcagcccatggacgggccggaccgggcggtcaac
accgaagccgcggtcgcctggtgtctcgcccatccgcgctggcgcctcagcctccagacc
cacaagctcatcggaatcccctga
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