Tenacibaculum mesophilum: F9Y86_05680
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Entry
F9Y86_05680 CDS
T06242
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp01501
beta-Lactam resistance
tmp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F9Y86_05680
01503 Cationic antimicrobial peptide (CAMP) resistance
F9Y86_05680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmp02000
]
F9Y86_05680
01504 Antimicrobial resistance genes [BR:
tmp01504
]
F9Y86_05680
Transporters [BR:
tmp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
F9Y86_05680
Antimicrobial resistance genes [BR:
tmp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F9Y86_05680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
SP24
Motif
Other DBs
NCBI-ProteinID:
QFS27905
LinkDB
All DBs
Position
complement(1253430..1256567)
Genome browser
AA seq
1045 aa
AA seq
DB search
MLQKFIERPVLSTVISIIIVILGVLSLTQLPVTQYPDIAPPTVQVTASYPGASAETILES
VIVPIEEQINGVEGMTYMTSTASNTGTASIQVFFEQGYDPDIAAVNVQNRVARANALLPS
EVTRAGVITAKQQNSALLYAAVYSTNPEYDDVFIQNYLNINVKPELQRVSGVGAVNVFGA
KDYSMRVWLDPAKMASYKLEPREVIAAINEQSLEAAAGSLGQNSGESFEYVIKYKGRYKT
AKEYENVVVKALGNGQFLRVKDVAKVELDAFSYSSLSRTNGNPALNFGVFQTPGSNAQEI
IENIYVKLEDLKKDFPEGLDYIINYDTNKFLTASVNKVKSTLIEAFLLVFVVVFIFLQDF
KSTLIPAIAVPVSIIGTFFFLNLFGYSINLLTLFALILAIGIVVDDAIVVVEAVHAKLED
GAESAKKASISAMSEISGAIVSITLVMVAVFVPITFIQGPSGVFYEQFGVTLMVAILISA
VNALTLTPALSALLLKPHNDTHKKKGLLQRFYDAFNAGFNAVTNKYTKSLGFLVKHKWVT
AGILGLSVLAIVWASNTIPTGFVPSEDRGVVFMNAELPAGSSLDRSYKVTEKLYESIKEI
EGIKGASFISGRNFFSGEGSSYAMGFIILEDWSERESDAESVKSIVGQLFGKAAMIPDAN
IIFFTPPSVPGFGSADGFEMRLLDRAAKPLTEMDATAKQFVGLLNQQPEIAFASNSFDTG
FPQLELDINVERAKEAGVSTSAILSALQGYIGGNYAADFSRFGKQFRVFVQSLPEDRINE
ESLNSMFIKTPSGEMTPISQFVSLERVYGPQTVNRFNLFNSVTVNGGITPGFSTGDAITK
INSLAENNLPEGYSVAYSGITREEIASSGQSTIIFMISILFVYFLLAAQYESYLLPLSVI
LSLPIGVAGAYYTTYLAGLENNIYFQIALIMLLGLLAKNAILIVEFAIQRRKQGNSLYDA
AIEGAKVRLRPILMTSFAFILGLLPLVLAKGVGAEGNNSIGTGAAGGLLIGTLIGVFVIP
VLFVIFQWLQEKVSSKPAVVEIKED
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaaaatttatagagcgtccggtactctctacagtaatttctattattatagta
atattaggagtactgtcattaacacaattaccggtaacgcaatatccagatattgcacca
ccaacggtgcaggttactgcttcttatccaggagctagtgccgaaacaattttagaaagt
gttattgttcctatagaagaacaaataaacggagtagaaggaatgacctacatgacttct
actgcaagtaatacaggtacagcaagtattcaagttttctttgaacagggatatgatcca
gatattgcagctgtaaacgtacaaaacagagtcgctagagccaatgcgttattaccttct
gaggtaacaagagcaggagttattacagcaaaacaacaaaactcagcattattatatgct
gcagtttactctacaaatcctgagtatgatgatgtttttattcaaaattacttaaatata
aacgtaaaaccagaattacaacgtgtatcaggggtaggagcagtaaacgtgtttggggca
aaagactattcgatgcgagtgtggttagacccagcaaaaatggcatcttataagttagaa
cctagagaagtaattgcagcgattaatgaacaaagtttagaggcagcagctgggtcttta
ggacaaaactcaggagagtcttttgaatatgtaattaaatataaaggacgatacaaaact
gcaaaagaatacgaaaacgttgttgtaaaagctctagggaatgggcagtttttacgtgtt
aaagatgtagcaaaagtagagctagatgcattttcatattcgtcattatcacgtacaaac
gggaatccagcacttaactttggtgtttttcaaacacctggatctaatgcacaagaaatt
attgaaaacatctatgtaaaactagaagatttaaagaaagattttcctgaaggattagat
tacattattaattatgataccaataaattcttaacagcatctgtaaacaaagtaaaaagt
actttaatagaagcctttttgttagtgtttgtagtagtatttatcttcttacaagatttt
aagtctaccttaatacccgcaatagcggttccagtatcaattattggtaccttctttttc
ttaaatctatttgggtactctatcaacttattaaccctattcgctttaattttagcaatt
ggaattgtggtagatgatgctattgtagtagtagaggcggtgcatgctaaactggaagat
ggagcagaaagtgcaaaaaaagcatcaatttcagcgatgagtgaaatcagtggtgctatt
gtgtctattacgttagtaatggtggcggtttttgtaccaattacgtttatacaaggtcca
tcaggagtattctatgagcaatttggggtaacactaatggttgctattttaatttcagca
gtaaacgcactaacactaacaccagctttaagcgcattactattaaaaccacataacgat
actcacaagaaaaaaggactattacagcgattttatgatgcatttaatgcaggatttaat
gcggtaactaataaatatactaaatctttagggtttttagtaaagcacaaatgggtaaca
gcaggtattttagggttaagtgttttggctattgtatgggcaagtaatacgatacctaca
ggatttgtaccttcggaagatagaggtgtagtctttatgaatgctgaattacctgcaggt
tcttctttagatagatcgtataaagtaacagaaaagttatatgaaagtattaaagaaata
gaaggaatcaaaggggcatcgtttattagtggaagaaactttttctcaggagaaggaagt
tcgtacgcaatgggctttattattctggaagattggagtgaaagagaaagtgatgctgaa
tcagttaaaagtatagtaggtcaactttttggtaaagcagctatgataccagatgcaaac
attattttctttaccccaccaagtgtaccaggttttggtagtgcagacggttttgaaatg
agattactagatcgtgcagccaaaccattaacagaaatggatgcaacagccaaacaattt
gttggtttgttaaatcaacaaccagaaatagcgtttgcttctaactcttttgacactgga
ttccctcagttagaactagatataaatgtagaaagagctaaagaagcaggagtatcaaca
agtgctatcctttcagctttacaaggatatattggaggaaattatgcagctgactttagt
agatttggaaaacaatttagagttttcgtacaatcgttgcctgaagacagaataaatgaa
gaaagcttaaatagcatgtttataaaaacaccaagtggagaaatgacaccaatctctcaa
tttgttagtttagaacgtgtatatggaccacaaacagttaatcgtttcaacctgttcaat
tcagtaacagtaaatggaggaatcacaccaggattcagtacaggagacgcaattactaaa
ataaatagtttagcagaaaataatttaccagaaggatatagtgttgcttattctggaatc
actagagaagagatagcatcatcaggacaatctaccattatttttatgattagtattctg
tttgtgtatttcttattagcagcacaatacgagagttatctattaccactatcagtaatt
ttatcattaccaattggggtagcaggagcatattatacaacatatttagcagggttagaa
aataacatctatttccaaatagctttaattatgttactaggattgttggctaagaatgcg
attcttattgtagagttcgcaatacagcgtcgtaagcaaggaaatagcttatacgatgct
gctattgagggagcaaaagtacgtttaagacctattttaatgacttcttttgcctttatt
ctagggttattaccattagtgttagcaaaaggagtaggagctgaagggaataattctatc
ggtaccggtgctgcaggaggattattaattggtactttaataggggtatttgttattcct
gtattatttgtaatattccaatggttacaagaaaaagtatcaagtaaaccagctgttgtt
gaaattaaagaagattaa
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