Tremella mesenterica: TREMEDRAFT_15985
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Entry
TREMEDRAFT_15985 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
tms
Tremella mesenterica
Pathway
tms00260
Glycine, serine and threonine metabolism
tms00270
Cysteine and methionine metabolism
tms00670
One carbon pool by folate
tms01100
Metabolic pathways
tms01110
Biosynthesis of secondary metabolites
tms01230
Biosynthesis of amino acids
Module
tms_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TREMEDRAFT_15985
00270 Cysteine and methionine metabolism
TREMEDRAFT_15985
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TREMEDRAFT_15985
Enzymes [BR:
tms01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
TREMEDRAFT_15985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
Auxin_repressed
Motif
Other DBs
NCBI-GeneID:
18491120
NCBI-ProteinID:
XP_007003799
JGI:
Treme1_15985
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
QHHWSGVLSSALDAVGHTPLIHLKRIQEAQGLQCRLLGKVEFFSAGGSVKDRIAKRMVEE
AEKDGRLIPGKSVIIEPTSGNTGMGLALASALKGYQCIITLPAKMSLEKEVMLRALGAEI
VRTPSWDSPESHIGVAHKLRDSMPNAVILDQYSNPNNPLAHYHTTFPEIMASPSFCSDFE
NKEIDLIVAGAGTGGTITGLSDAIRDREKAFPEKNKTTVVAVDPVGSILGGGEPGNYAVE
GIGYDFFPEVLKPDAPSIDDWVKVNDDEAFAMTKLMIRKEALFVGGSSGSALAGALKYLH
SPKGQSIASNPNANVIIILPDGVRNYLSKDWFLEGAQGPSNPLREKMREIIGRELGDAYG
TRS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
caacatcattggtcgggtgttctctcttcggctctcgatgcggtgggacatacccctctc
atccacttgaagcgtatacaagaggctcaaggtctacaatgtagactattgggcaaagtt
gaattcttctctgcaggcggatcggtcaaagatcgtattgccaagcgaatggttgaggaa
gcggagaaagatggaagattgatacccggcaaaagcgtcatcatagagcctaccagcggt
aacacagggatgggactcgctttggcctccgcgctaaaaggatatcaatgcatcataacc
cttccggcaaaaatgagtttagaaaaggaagttatgctccgtgctctgggagctgagatt
gttcggacccccagttgggatagtcccgagagtcatataggtgtggcccacaaactaaga
gactccatgcctaatgctgtgattttggaccaatatagtaaccccaacaatcctcttgca
cactaccacaccaccttcccggaaatcatggcaagtccctcgttctgttctgactttgaa
aacaaagaaatcgatctgatcgttgcgggtgctggaacaggagggacgataacaggttta
tcggatgctatacgagatagggagaaagcttttccagagaagaacaagacgacggtggta
gctgttgatcctgtgggttcgatcttgggtggtggtgaacctggaaattatgcagtggag
ggtattggttatgacttcttcccagaggtgctgaaacccgacgctccgtctatcgatgat
tgggtcaaagtgaatgatgatgaggcgttcgccatgaccaaactcatgatacgaaaagaa
gctcttttcgtaggaggttcatccggttccgctcttgccggtgctctaaaatatcttcat
tcccctaaaggtcaatctatagcttccaatcccaacgcaaacgtcatcatcatccttcct
gacggcgtacggaactacctctcgaaagattggttcttagaaggagcgcaaggtccctct
aatcctttacgagagaaaatgagggagattatcggtcgagaattgggtgatgcgtatggt
acacgatcc
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