KEGG   Tremella mesenterica: TREMEDRAFT_30658
Entry
TREMEDRAFT_30658  CDS       T03139                                 
Name
(RefSeq) ring box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tms  Tremella mesenterica
Pathway
tms03420  Nucleotide excision repair
tms04111  Cell cycle - yeast
tms04120  Ubiquitin mediated proteolysis
tms04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    TREMEDRAFT_30658
   04120 Ubiquitin mediated proteolysis
    TREMEDRAFT_30658
  09124 Replication and repair
   03420 Nucleotide excision repair
    TREMEDRAFT_30658
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    TREMEDRAFT_30658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tms04121]
    TREMEDRAFT_30658
   03400 DNA repair and recombination proteins [BR:tms03400]
    TREMEDRAFT_30658
Enzymes [BR:tms01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     TREMEDRAFT_30658
Ubiquitin system [BR:tms04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   TREMEDRAFT_30658
  Multi subunit type E3
   SCF complex
    Ring finger protein
     TREMEDRAFT_30658
   Cul2 complex
     TREMEDRAFT_30658
   Cul3 complex
     TREMEDRAFT_30658
   Cul4 complex
     TREMEDRAFT_30658
   Cul7 complex
     TREMEDRAFT_30658
   Cul8 complex
     TREMEDRAFT_30658
   Cul9 complex
     TREMEDRAFT_30658
DNA repair and recombination proteins [BR:tms03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      TREMEDRAFT_30658
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      TREMEDRAFT_30658
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 18492133
NCBI-ProteinID: XP_007004446
JGI: Treme1_30658
LinkDB
Position
Unknown
AA seq 103 aa
MEVDPPTQSLKSDKKPRFEVKKWNAVALWSWDIVVENCAICKNHIMDLCIECQANQGAES
DGCTVAWGICNHAFHFHCISRWLKTRHVCPLDNRQWELQKYGR
NT seq 312 nt   +upstreamnt  +downstreamnt
atggaagtggatcctccgactcaatccttgaaatcggacaagaaaccgaggttcgaagtg
aaaaagtggaatgctgtagctctttggtcatgggatatcgtagttgaaaactgcgccatc
tgtaagaatcacatcatggatctctgtatagaatgtcaagcgaaccaaggtgccgaaagt
gatggctgcacagtcgcttggggtatttgcaaccacgcattccatttccattgtatttcc
cgttggctcaaaacgcggcatgtatgtcctctggacaatcgacaatgggaattgcagaaa
tacggccgttaa

DBGET integrated database retrieval system