Tremella mesenterica: TREMEDRAFT_46186
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Entry
TREMEDRAFT_46186 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
tms
Tremella mesenterica
Pathway
tms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TREMEDRAFT_46186
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tms01007
]
TREMEDRAFT_46186
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_46186
Enzymes [BR:
tms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
TREMEDRAFT_46186
Amino acid related enzymes [BR:
tms01007
]
Aminoacyl-tRNA synthetase
Class I (U)
TREMEDRAFT_46186
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TREMEDRAFT_46186
Prokaryotic type
Other AARSs
TREMEDRAFT_46186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
18493854
NCBI-ProteinID:
XP_007008690
JGI:
Treme1_46186
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MFPLGRLPVLPRYIILQHVVGSCRSLSSNSIFPSQDKKAYSHTLLLPKTSMPLKVKDPVQ
HERRYRQRTSQDLYRKQRSRKTAKEFVLHDGPPYANGNLHMGHALNKVLKDMVNRWKVMR
GYRVHYVPGWDCHGLPIEMKALERIGRQAANPDLGPNRIRSEARKTALKAIEIQKREQQE
LGVMADWDSPDGVYRTLDHDFEVRQLRLFQRMVSKGYIAHRLRPTYYSPSTRTALAEAEL
KYKDGHKSRSVYVAFPVEKSDMSPALTKAYEDAQKQKGPVSLSLAIWTTTAWSLPGNMGV
AVNQDMEYSIVRSDTAGLLVVATERLLALQNILGPLESLHSLSGADLVGTRYTHLFHSKT
SSLPRPTVFASNHVLPTSGTGLVHSAPAHGYEDYQGMTVAGVLPKELRCPIDDDGRFTAA
VTRETDKDDVARLIGQEVLGAGIGTMIDLLRSEGSLLAEEVIEHRYPYDWKTNQPIIVRA
TPQWFADVESIKDEAVKALEEVHFVPPQSRNRLEAFIVSRSEWCISRQRSWGVPIPALYT
ETGEPIIDEDTMTHIISVLQEKGTDHWWTGPAEDFIPPGLKGQRVYKGTDTLDVWFDSGS
SWSMLQGLKSEEDSTPLADVYLEGSDQHRGWFQSSILTKISADDLNNPRPPYGTLITHGF
VLDEEGQKMSKSEGNGISPMEVIHGSKDITLMKQSLPASGTDALRIWAASVEYTRDVSIG
PSSIAQASETLRKLRSALRFLLANTAPGDAKSLDQVELSPLDSYVIKELDKVRQTVIDAY
DSYAFNKVLQTLTTFTASTLSSLYFDTIKDSLYCNAAADPTRQAVIATLDHVLRQLLKMI
APIVPHLAEEVFEHREKSLGLSVFDDPWLSEVSKYTY
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgttcccattgggacgtttgcccgtcttacctaggtatataatccttcagcatgtcgtc
ggttcttgccgttccttgagctcgaattccatcttcccaagccaagataagaaggcttac
tctcacactttgctccttcccaagacctcgatgcccctcaaggtcaaggaccccgtacag
cacgagcgtcgttacaggcagcgaacatcccaagatctttaccgaaagcagaggtctcgc
aagaccgccaaggaatttgtgctgcacgatgggcctccttatgccaacggcaacttgcat
atgggccatgccctcaataaggtgttaaaagacatggtgaaccgctggaaggtcatgaga
ggataccgagtacactacgtaccaggatgggattgtcatggtctgcctatagagatgaag
gccctggagcgtatcggaagacaagcagccaatccagatctggggccgaatagaatacga
agcgaagcaagaaagaccgccttgaaggcgatcgagatccagaagagggagcaacaggaa
ctgggggtgatggcggattgggacagtccagatggagtgtatcggacccttgatcacgac
ttcgaagtacgacaactgagattgttccagaggatggtgtcgaaaggttatatcgctcac
cgactccgccccacatattattccccatcgacccgaacagcattagccgaggctgaactc
aaatataaagacggccacaaatctcgttcagtctacgtagcctttccagtggagaaaagc
gacatgtcccccgctctcactaaagcatacgaggatgctcagaaacaaaaaggtcctgtc
tctctatccctggcgatttggaccactactgcttggagtctgcctggcaatatgggtgta
gccgtgaatcaagacatggaatattcaattgtcaggtccgacacagctggcttactagtc
gtggcgaccgaacgacttctagcactccaaaacatactcggaccgctcgagagccttcac
agtctttcaggagccgatctcgtcggcacccgatatacccatctgtttcattcaaagaca
tcgtccctccctcggccgaccgtctttgcttccaatcatgttcttcccacgtcgggtacc
ggcttggttcactctgcacccgcgcatgggtacgaagactaccaaggtatgacagtggct
ggggtactccctaaagagctgcgatgtccgatcgatgatgacggacgcttcaccgccgca
gtcacccgcgagactgacaaggatgacgtcgcgagactgatcggacaggaggtgctcgga
gctggaataggcactatgatagacttactgcgtagcgaagggagcctgcttgctgaagag
gtgatcgagcatcggtacccatatgattggaagaccaatcagcctatcatcgtccgtgcg
acgccacagtggtttgcagatgtggaatcgatcaaggacgaggcagtcaaagcgttggaa
gaggtacacttcgtgccaccacaatcgcgcaatcgtttggaagccttcatcgtctctcgc
tcggaatggtgcatctctcgtcagaggagctggggtgttcctatcccagctctgtatacc
gagacaggggagccgatcatcgacgaggacacgatgacacatattatcagtgtcctacaa
gagaagggcaccgatcactggtggaccgggcccgcggaagacttcatacctcccggcctg
aaaggtcagcgggtctacaagggaaccgacacactagacgtatggttcgacagcgggtcc
tcgtggagcatgcttcaaggactcaagtctgaagaagacagtacaccactggcggatgtc
tatctagaagggtcagaccagcatcggggctggttccaatcatcaattctcacgaaaatc
agcgcggacgatctgaacaacccacgaccaccttatggcactttgatcacccacggcttc
gttctcgatgaagaaggacagaagatgagtaaatcagaaggaaacggaatctcacctatg
gaggtgatccatgggtcaaaggacattacgctcatgaagcagagccttccagcgtctggg
acagatgctctccgaatctgggccgcgtccgttgagtataccagagatgtctccatagga
ccttcctccatcgcccaagcgtctgagaccctccgaaagcttcgaagcgctttgaggttc
cttcttgccaacactgctccaggtgacgccaaatctctcgaccaagtcgaattaagtccc
cttgactcctatgttatcaaggaactggacaaggtccggcaaaccgtcatcgacgcatac
gactcatacgccttcaacaaagtgctccaaaccctgactacgttcaccgcatccacactt
tcctctctctacttcgataccatcaaagattcactgtactgcaatgctgctgcggatcca
acacggcaagcggtcatagccacgttggatcatgtcctccggcagttgttgaaaatgatc
gcccctattgtgccgcatttagccgaggaagtattcgagcatcgcgaaaagtcgttaggt
ttgtccgtcttcgatgacccatggctttccgaagtgagtaaatatacttactga
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