Trichechus manatus latirostris (Florida manatee): 101344047
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Entry
101344047 CDS
T05135
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04015
Rap1 signaling pathway
tmu04115
p53 signaling pathway
tmu04145
Phagosome
tmu04148
Efferocytosis
tmu04151
PI3K-Akt signaling pathway
tmu04350
TGF-beta signaling pathway
tmu04510
Focal adhesion
tmu04512
ECM-receptor interaction
tmu04820
Cytoskeleton in muscle cells
tmu05144
Malaria
tmu05165
Human papillomavirus infection
tmu05205
Proteoglycans in cancer
tmu05206
MicroRNAs in cancer
tmu05219
Bladder cancer
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
101344047
04350 TGF-beta signaling pathway
101344047
04151 PI3K-Akt signaling pathway
101344047
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101344047
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101344047
04148 Efferocytosis
101344047
09143 Cell growth and death
04115 p53 signaling pathway
101344047
09144 Cellular community - eukaryotes
04510 Focal adhesion
101344047
09142 Cell motility
04820 Cytoskeleton in muscle cells
101344047
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
101344047
05205 Proteoglycans in cancer
101344047
09162 Cancer: specific types
05219 Bladder cancer
101344047
09172 Infectious disease: viral
05165 Human papillomavirus infection
101344047
09174 Infectious disease: parasitic
05144 Malaria
101344047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101344047
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tmu00536
]
101344047
Membrane trafficking [BR:
tmu04131
]
Endocytosis
Phagocytosis
Opsonins
101344047
Glycosaminoglycan binding proteins [BR:
tmu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101344047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
EGF_CA
Laminin_G_3
TSP1_ADAMTS
cEGF
Laminin_G_2
TSP1_CCN
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
101344047
NCBI-ProteinID:
XP_004380670
UniProt:
A0A2Y9DUD7
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MGLAWGLGVLLLLQVCGANRIPESGGDNSVFDIFELTGAARKGSGRRLVRGPDPSSPAFR
IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLALERKDHSGQIFSVV
SNGKAGTLDLSLTVQGKQHVVSVEDALLATGQWKGITLFVQEDRAQLYIDCEKVENAELE
VPIQSIFTRDLASIARLRVAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTNVLL
TLDNNVVNGSSPAIRTSYIGHKTKDLQAICGISCDDLSNMVLELRGLRTIVTTLQDSIRK
VTEENKELANELRRSPLCYHNGVQYKNNEEWTVDSCTECRCQNSVTICKKVSCPIVPCSN
ATLPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQT
RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGDARE
TKACKKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCIGDVTENQI
CNKQDCPIDGCLSNPCFAGANCTSYPDGSWKCGACPVGYSGNGIQCKDVDECKEVPDACF
NHNGEHRCKNTDPGYNCLPCPPRFTGTQPFGQGVEHATANKQVCKPRNPCTDGTHNCNKN
AKCNYLSHYSDPMYRCECRPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPN
LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN
HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDMDMDGVGDQCDNCPLEH
NPDQLDSDSDRVGDTCDSNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN
DGVPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDQDNVPDIDDICPENVDISETDFRRF
QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAIGFDEFNAVDFSGTFFINTERDD
DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL
WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD
KTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggggctggcctggggactcggtgtcctgcttctgctgcaagtgtgtggcgccaaccgc
attccagagtctgggggagacaacagcgtgtttgacatctttgaactcaccggagctgcc
cgcaagggctctgggcgccggctggtgaggggccctgacccctccagcccagctttccgc
atagaggatgccaacctgatcccccctgtgcctgatgacaagttccaagacctagtggat
gctgtgcgggcagagaaggggttcctcctcctggcctctctgcggcaaatgaagaagacc
cggggcacactgctggccctcgaacggaaggaccactctggccagatcttcagcgtggtc
tccaacggcaaggcgggcaccctggacctgagcctgactgtgcaggggaagcagcacgtg
gtgtcggtggaagacgcgctcctggcaaccggccagtggaagggcatcaccctgtttgtg
caggaggacagggcccagctgtacatcgactgtgagaaagtggagaacgctgagctagag
gtccccatccagagcatcttcaccagggacctggccagcatcgccagactccgcgttgca
aagggaggcgtcaatgacaacttccagggggtgctgcagaacgtgaggtttgtctttgga
accacaccagaagacatcctgaggaacaaaggctgctccagttctaccaacgtccttctc
actctcgacaacaacgtggtgaatggttccagccccgccatccgcaccagctacattggc
cacaaaacaaaggacctgcaggccatctgcggcatctcctgtgatgacctgtccaacatg
gtcctggaactcagaggcctgcgtaccatcgtcaccacgctccaggacagcatccgcaaa
gtgactgaagagaacaaggaattggccaatgagctgaggcggtctcccctctgctatcac
aacggagttcagtacaagaacaatgaagagtggactgtggatagctgcacagaatgtcgt
tgtcagaactcagtcaccatctgcaaaaaagtgtcctgccccattgtgccctgttccaac
gccacgcttcccgatggagaatgctgcccgcggtgctggcccagcgactctgcagatgat
ggctggtctccatggtctgagtggacctcctgctccgtgacatgtggcaacggaattcag
cagcgcggccgctcctgtgacagcctcaacaaccgatgtgagggctcctcggtccagacg
cggacctgccacattcaggagtgcgataaaagatttaaacaggatggcggctggagccac
tggtccccgtggtcatcttgttcggtgacatgtggtgatggtgtgatcacaaggatccgg
ctctgcaactctcccagcccccagatgaatgggaagccatgtgaaggcgacgctcgagag
accaaagcctgcaagaaagacgcctgcccaatcaatggaggctggggtccctggtcaccg
tgggacatctgttctgtcacctgtggaggaggggtgcagaaacgtagccggctctgcaac
aaccccacaccccagtttggaggcaaggactgcattggtgatgtgacagaaaaccagatc
tgcaacaagcaggattgtccaattgatggatgtctgtccaatccctgcttcgccggtgcc
aattgtactagttaccccgatggcagctggaaatgcggtgcttgccctgtaggttacagt
ggaaatggcatccagtgcaaagatgttgatgagtgcaaagaagtgcccgatgcctgcttc
aaccacaatggagagcacaggtgtaagaacacggaccctggctacaactgtctgccctgc
ccacctcgcttcactggcacgcagccctttggccagggtgttgaacacgccactgccaac
aaacaggtttgcaagccccgcaacccctgcacggacgggacacacaactgcaacaagaac
gccaagtgcaactacctcagccattacagcgaccccatgtaccgctgtgagtgcaggcct
ggctacgcaggcaatggcatcatctgcggggaggacacagacctcgacggctggcccaac
gaggacctggtctgtgtggccaatgcaacttaccactgcaaaaaggataactgccccaac
ctccccaactcagggcaggaagactatgacaaggatggaattggtgatgcctgtgatgac
gacgatgacaacgataaaatcccagatgaccgggacaactgtccattccattacaaccca
gcccagtatgactatgacagagatgacgtgggagaccgctgtgacaactgtccctacaac
cacaacccagatcaggctgacacagacaacaacggggaaggagatgcctgcgcagcagac
attgacggcgatggcatcctcaatgaaagagacaactgccagtatgtgtacaatgttgac
cagcgggatatggatatggatggggttggagatcagtgtgataactgtccgctggaacac
aatccagatcagctggactctgattcggaccgcgttggagatacctgtgacagcaatcag
gatattgatgaagacggccaccagaacaacctggacaactgcccctatgtgcccaatgcc
aaccaggctgaccatgacaaagatggcaagggagatgcctgtgaccacgatgatgacaat
gatggtgttcctgatgacagggacaactgcagactggtgcccaatcctgaccagaaggac
tctgacggtgatggtcgaggtgatgcttgcaaggatgattttgaccaggacaatgtgcca
gacatcgatgacatctgtcctgagaatgttgatatcagtgaaaccgatttccgccgattc
cagatgattcctctagatcccaaaggaacatcccaaaatgatcctaactgggttgtacgc
catcagggtaaagagcttgtccagactgtcaactgtgatcctgggcttgctatcggtttt
gatgagtttaatgctgtggacttcagcggcacattcttcatcaacaccgagagggacgat
gactatgccggatttgtgtttggctaccagtccagcagccgcttctatgttgtgatgtgg
aagcaggtcacccagtcctactgggacaccaaccccacaagggctcaggggtactcaggc
ctttctgtgaaagttgtgaactccaccacggggcctggcgagcacctgcggaatgctctg
tggcatacaggaaacacccctggccaggtgcgaaccctgtggcatgaccctcgtcacata
ggctggaaagatttcaccgcctacagatggcgtctcagccacaggccaaagacaggcttc
attagagtggtgatgtatgaagggaagaaaatcatggctgactcgggacccatctatgac
aagacctatgctggaggcaggctagggttgttcgtcttctctcaagaaatggtgttcttc
tcggacctgaaatacgagtgcagggattcctaa
DBGET
integrated database retrieval system