KEGG   Trichechus manatus latirostris (Florida manatee): 101345331
Entry
101345331         CDS       T05135                                 
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04010  MAPK signaling pathway
tmu04064  NF-kappa B signaling pathway
tmu04120  Ubiquitin mediated proteolysis
tmu04140  Autophagy - animal
tmu04144  Endocytosis
tmu04380  Osteoclast differentiation
tmu04620  Toll-like receptor signaling pathway
tmu04621  NOD-like receptor signaling pathway
tmu04622  RIG-I-like receptor signaling pathway
tmu04657  IL-17 signaling pathway
tmu04722  Neurotrophin signaling pathway
tmu04936  Alcoholic liver disease
tmu05132  Salmonella infection
tmu05133  Pertussis
tmu05135  Yersinia infection
tmu05140  Leishmaniasis
tmu05142  Chagas disease
tmu05145  Toxoplasmosis
tmu05152  Tuberculosis
tmu05160  Hepatitis C
tmu05161  Hepatitis B
tmu05162  Measles
tmu05168  Herpes simplex virus 1 infection
tmu05169  Epstein-Barr virus infection
tmu05170  Human immunodeficiency virus 1 infection
tmu05171  Coronavirus disease - COVID-19
tmu05200  Pathways in cancer
tmu05222  Small cell lung cancer
tmu05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
tmu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101345331
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101345331
   04064 NF-kappa B signaling pathway
    101345331
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101345331
   04140 Autophagy - animal
    101345331
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    101345331
   04621 NOD-like receptor signaling pathway
    101345331
   04622 RIG-I-like receptor signaling pathway
    101345331
   04657 IL-17 signaling pathway
    101345331
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    101345331
  09158 Development and regeneration
   04380 Osteoclast differentiation
    101345331
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101345331
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    101345331
  09162 Cancer: specific types
   05222 Small cell lung cancer
    101345331
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    101345331
   05161 Hepatitis B
    101345331
   05160 Hepatitis C
    101345331
   05171 Coronavirus disease - COVID-19
    101345331
   05162 Measles
    101345331
   05168 Herpes simplex virus 1 infection
    101345331
   05169 Epstein-Barr virus infection
    101345331
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    101345331
   05135 Yersinia infection
    101345331
   05133 Pertussis
    101345331
   05152 Tuberculosis
    101345331
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    101345331
   05140 Leishmaniasis
    101345331
   05142 Chagas disease
    101345331
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    101345331
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    101345331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tmu04131]
    101345331
   04121 Ubiquitin system [BR:tmu04121]
    101345331
Enzymes [BR:tmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101345331
Membrane trafficking [BR:tmu04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    101345331
Ubiquitin system [BR:tmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    101345331
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 zf-TRAF_2 SlyX zf-RING_11 TRAF3_RING U-box RING_XB3-XBAT31 DUF7310 DUF16 Sina_ZnF HAP1_N Spc29 DUF3450 ATG16 PspA_IM30 TACC_C CENP-F_leu_zip
Other DBs
NCBI-GeneID: 101345331
NCBI-ProteinID: XP_004369863
UniProt: A0A2Y9RIB6
LinkDB
Position
Unknown
AA seq 541 aa
MSVLNCENSCGSSQPDSDCCAAMASSCSVAAKDDSVSGTTSTGNLSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLRVKCPNAGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKCHLNIHILT
ECPRRQVSCVNCAILMAFEDKEIHDQNCPLANVICEYCNTVLIREQMPNHYDLDCPTAPI
PCAFSTFGCLEKMQRNHLARHLQENTQSHMRMLAQAVQNLSLALTPVPHCDILPYDSAPL
SQVSSGCHPEVQNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVGELKRTIRTLEDRI
AEMEAQECNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGRPGYKLCMRLHLQLPSAQ
RCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSETPIRQNHEEIMDAKPELLAFQR
PTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVCTRFDMGSLRREGFQPRSTDAG
V
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgagtgtgctaaactgtgaaaacagctgtggatccagccagcccgacagtgactgttgt
gctgccatggccagctcctgtagcgttgcagccaaagatgacagtgtgagtgggaccacc
agcaccgggaacctctccagttcctttatggaagagatccaggggtatgatgtggagttt
gacccacccctggaaagcaagtacgaatgccctatctgcttgatggcattacgggaagca
gtgcaaacaccatgtggccatagattctgcaaagcctgcatcaccaaatcaataagggat
gctggtcacaaatgtccagtcgacaatgaaatactgctggaaaatcaactatttcctgat
aattttgcaaaacgagagattctttctctgagggtgaagtgtccaaatgcaggttgtttg
cacaagatggaactgaggcatctagaggatcatcaagcacattgtgagtttgctcttatg
gattgtccccaatgccagcgtcccttccaaaaatgccatcttaatattcacattctcacg
gagtgtccaaggagacaggtttcttgtgtgaactgtgctatattaatggcatttgaagat
aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatacc
gtgctcatcagagaacagatgcctaatcattatgatctggactgtcctacggccccaatt
ccatgtgcattcagtacttttggttgccttgaaaagatgcagaggaatcacttggcacgc
cacctgcaagagaatacccagtcacacatgagaatgttggcccaggctgttcagaattta
agccttgctttaactcccgtgcctcattgtgatatacttccatatgattctgcccctctg
tcccaagtgtcttctgggtgtcacccagaggtccagaatttccaagaaaccattcaacag
ttagagggtcgccttgtaagacaagaccatcaaatccgggaactgactgctaaaatggag
actcagagcatgtatgtcggtgagctcaaacgaactattcgaacgcttgaggacagaatt
gcggaaatggaagcacaggagtgcaatgggatttacatctggaagattggcaattttggg
atgcacttgaaatgccaagaagaggagaaacctgttgtcattcatagccccggattctac
actggcagacccggctacaaattgtgcatgcgcctgcaccttcagctgccaagtgctcag
cgctgtgcaaactatatttccctctttgtccacacaatgcaaggagagtatgacagccac
ctgccttggcccttccagggcacaatacgccttacaattctagatcagtccgaaacaccc
ataaggcaaaaccatgaagagatcatggatgccaaaccagagctgcttgccttccagcga
cctacaatcccacggaacccaaaggggtttggttatgtaacttttatgcacttagaagcc
ctaagacaaagaaccttcattaaggatgatacgttactagtgcgctgtgaggtctgtacc
cgctttgacatgggtagccttcggagggagggctttcagccacgaagtactgatgcaggg
gtatag

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