Trichechus manatus latirostris (Florida manatee): 101346128
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Entry
101346128 CDS
T05135
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101346128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101346128
Spliceosome [BR:
tmu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101346128
Complex C
U5 SnRNP specific factors
101346128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
101346128
NCBI-ProteinID:
XP_004374340
UniProt:
A0A2Y9DHQ7
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGREAKDLDEMDDDDDDDDIGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaactgggcagagaggccaaagatcttgatgagatggatgatgatgat
gatgacgacgacataggagatcatgatgacgatcaccccgggatggaggtggtgctacat
gaggacaagaagtactaccccacagccgaggaggtgtacggtcctgaggtggagaccata
gtccaggaggaagacacccagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacgttacctgtcacggtgtatgaaatggatttcttggca
gatctgatggacaactcagagctcatcagaaatgtgaccctttgtggccatctccaccat
ggcaagacgtgttttgtagattgtttaatagaacagactcacccggaaatcagaaaacgc
tatgaccaagatctgtgctacactgacatccttttcactgaacaagagagaggtgttggc
atcaaaagcactcctgtgacagtggtcctgccagataccaaaggaaaatcttatctcttc
aatatcatggacactccaggacatgtgaatttttctgatgaagtcacagctggcttgcgc
atctcagatggagtggtccttttcatcgatgctgctgagggggtgatgttgaacaccgag
cggctgatcaagcacgccgtgcaggagaggctggcagtcaccgtgtgcatcaacaagatt
gaccggctcatcctggagctcaagctgcctccaactgatgcttactacaagctgcgccac
attgtggacgaggtcaatgggttaataagcatgtattccactgatgagaacttgatcttg
tctccactcctgggcaacgtctgcttttccagctcccagtatagcatctgcttcacactg
ggctcctttgccaagatctacgctgacacctttggtgacattaattaccaggaatttgct
aaaagactctggggtgacatctacttcaaccccaagacgagaaagttcacaaaaaaggcc
cccaccagcagctcccagaggagctttgtggagtttatcttggaacccctttataagatc
ctcgctcaggttgtgggtgatgtggacaccagcctcccgaggaccctggatgaacttggc
atccacctgaccaaggaggagctgaagcttaacatccgcccgctgctcaggctggtctgc
aaaaagttctttggcgagttcacgggctttgtggacatgtgtgtacagcatatcccctct
ccaaaggtgggcgccaagcccaagatcgagcacacctacactggcggcgtggactccgac
ctcggggaggccatgagtgactgtgaccctgatggtcccttgatgtgccatactaccaag
atgtacagcacagatgatggagttcaatttcatgcctttggccgggtgctgagtggcact
atccatgctgggcagcctgtgaaggttcttggggagaactacaccctggaggatgaggaa
gactcacagatatgcaccgtgggccgcctttggatctctgtggccaggtaccacattgag
gtgaaccgtgttccagctggcaactgggttctgattgaaggtgttgatcaaccaattgtg
aaaacagcgaccatcactgaacctcgaggaaatgaggaggctcagattttccggcccttg
aagttcaacaccacatctgtgatcaagattgctgtggagccagtcaacccatcagagctg
cccaagatgctcgacggcctacgcaaggtcaacaagagctacccatccctcaccaccaag
gtggaagagtctggcgaacatgtgatcctgggcactggggagctctacctggactgtgtg
atgcatgatttgcgaaagatgtactcagagatagacatcaaggtggctgacccagttgtc
acattttgtgagacggtggtggaaacgtcctccctcaagtgctttgctgaaactcccaat
aagaagaacaagatcaccatgattgctgagcctcttgagaagggcctcgccgaggacata
gagaacgaggtggtccaaatcacatggaacaggaagaagctgggagagttcttccagacc
aagtacgattgggatctgctggctgcccgttccatctgggcctttgggcctgatgccact
ggtcccaacatcctggtggatgataccctgccctctgaggtggacaaggctcttctgggc
tcagtgaaggacagcatcgttcaaggttttcagtggggaaccagggagggtcccctctgt
gatgagttgattcgaaatgtcaagtttaagatcctggatgcagtggtggcccaggagccc
ctgcaccggggcgggggccagatcatccccacagccagaagagtcgtttattcagccttc
ctcatggccacacctcgtttgatggagccttactactttgtagaggtacaggcccctgca
gattgtgtctctgctgtttataccgtactggccaggcgcagggggcacgtgactcaggat
gcacccatcccaggctcccctctctacaccatcaaagctttcattccggccatcgactct
tttggctttgaaaccgatctgcggactcatacccagggacaggcattttccctgtctgtc
ttccaccattggcagattgtacctggtgatcctctggacaagagcattgtcatccgcccc
ctggagccacagccagctcctcacctggcccgggaattcatgatcaaaacccgtcgtagg
aagggcctgagtgaagatgtgagcatcagcaagttcttcgatgatcctatgttgctggag
cttgccaagcaggatgttgtgctcaattaccccatgtga
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