Trichechus manatus latirostris (Florida manatee): 101346244
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Entry
101346244 CDS
T05135
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
101346244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101346244
Transcription factors [BR:
tmu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
101346244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
PS-DH
Motif
Other DBs
NCBI-GeneID:
101346244
NCBI-ProteinID:
XP_004382709
UniProt:
A0A2Y9DX41
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MNQPAPGAPPAPRRVRLKPWLVAQVNSCQYPGLQWVNGDRKFFYIPWRHATRHGPGQEGD
NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
CSHGPAPTEAQPSEDHTFGPGEEEEEEEEELQRMLPSLSLTEAVQPGPSMGPYSVPKEEL
KWPPTLQPPVVLGPSAPEPNLLAHPHNDPASFGELLPEVLLEPGPLAASLPPAGEQLLPD
LLISPHMLPLTDLEIKFQYRGRPPCALTISNPHGCRLFYSQLEATQEQVELFGPVSLEQV
RFPSPEDIPSEKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCAEADATR
PNPIQREVKTKLFSLEQFLHELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQ
VVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHLWQSQQRVQAVAQA
PPGPGLMADQGPWPMHPVGMQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcccgcccccggggctccccccgcaccccgccgggtgcggctgaagccctgg
cttgtggcccaggtgaacagctgccagtacccagggcttcagtgggtcaacggggacagg
aagttcttctacatcccctggcgccacgccacgcggcacggccccggccaggaaggagac
aacaccatcttcaaggcctgggccaaggagaccgggaagtacaccgagggcgtggatgag
gccgaccccgccaagtggaaggccaacctgcgatgcgcccttaacaagagccgcgatttc
cgcctcatctatgatgggccccgggacatgccgcctcagccctacaagatctacgaggtc
tgctcccacggcccggcacccacagaagcacagcccagtgaggaccacacctttgggcca
ggagaggaggaggaggaggaagaggaagagctccagaggatgttaccaagcctgagcctc
acggaagcagtacagcctggcccctccatgggaccctattctgtacccaaagaagagctc
aagtggccccctactctccagccgcctgtggtgctgggcccctctgctccagagcccaac
ctcctggcccatccccacaacgaccctgctagctttggggagctgctccccgaggtcctg
ctggagcctgggcccctggccgccagcctgccccctgcaggcgaacaactcctgcccgac
ctgctgatcagcccccacatgctgcccttgaccgacctggagatcaagttccagtaccgt
ggccggccgccctgtgccctcaccatcagcaacccacacggctgccggctcttctacagc
cagctggaggccacccaggagcaggtggagctcttcggccccgtgagcctggagcaggtt
cgcttccccagtcccgaggacatccccagtgagaagcagcgcttctacaccaaccagctg
ctggacgtgctggaccgcgggctcatcctgcagctacagggccaggacctgtacgccatt
cgcctgtgccagtgcaaggtgttctggagcgggccctgtgccgaggccgacgccacgcgc
cccaaccccatccagcgggaggtgaagaccaagctcttcagccttgagcagtttctccac
gaactcatcctgttccagaagggccagaccaacaccccaccgccgtttgagatcttcttc
tgctttggggaggagtggcctgaccgcaaaccccgagagaagaagctcatcactgtacag
gtggtgcccgtggcggcccgattgctgctggagatgttctcaggggagctttcctggtcg
gctgacagtatccggcttcagatctcaaacccagacctcaaagaccgcatggtggagcag
tttaaggagctccatcacctctggcagtcccagcagcgggtgcaggccgtggcgcaggcc
cctcctgggccaggtctcatggctgaccaggggccctggcccatgcacccagttggcatg
caataa
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