Trichechus manatus latirostris (Florida manatee): 101350849
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Entry
101350849 CDS
T05135
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04140
Autophagy - animal
tmu05014
Amyotrophic lateral sclerosis
tmu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101350849
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101350849
05022 Pathways of neurodegeneration - multiple diseases
101350849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101350849
Membrane trafficking [BR:
tmu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
101350849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
101350849
NCBI-ProteinID:
XP_004387805
UniProt:
A0A2Y9E7D0
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIVLSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVSEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCETESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLILHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctctgtccgccaccatctccagctgttgccaagacagagattgtattaagt
ggtgaatcacctttactagcggctacctttgcttactgggacaatattcttggtcctaga
gtaaggcacatttgggctccaaagacagaacaggtacttctcagcgacggagaaataact
tttcttgctaaccacaccctaaatggggaaatccttcgaaatgcagagagtggagctata
gatgtaaagttttttgtcttgtctgaaaaaggagtaattattgtttctttaatcttcgat
ggaaactggaatggggataggagtacatatggactgtcaattatactcccacagacggaa
cttagcttctatctcccacttcacagagtgtgtgttgatagattaacacacattattcgg
aaaggaaggatatggatgcataaggaaaggcaagaaaatgttcagaagattgtcttagaa
ggcacagagagaatggaagatcagggtcagagtattattccaatgcttactggggaagta
attcctgtaatggaactgctttcatcaatgaaatcacacagtgtttctgaagaaatagat
atagctgatacagtactcaatgatgatgatattggtgacagttgtcatgaaggcttcctt
ctcaatgccatcagctcacacctacaaacatgtggctgttctgtagtcgtgggtagtagt
gcagagaaagtgaataagatagtgagaacgttatgcctttttctgactccagcagagaga
aaatgctccagattatgtgaaactgaatcatcatttaaatatgagtcagggctctttgta
caaggcctgctaaaggattcaactggaagctttgtgctacccttccggcaagtcatgtac
gctccctatcccaccacgcacatagatgtggacgtcaatactgtcaagcagatgccaccc
tgtcacgaacatatttataatcagcgtagatacatgagatcagagctgacagcattctgg
agagccacttcagaggaagacatggctcaggatacgatcatctacacagatgagagcttc
actcctgatttgaacatttttcaagatgttttacatagagacactctagtaaaagccttc
ctagatcaggtcttccatttaaaacccggtttatctctcaggagtactttccttgcacag
tttctactcatccttcacagaaaagcgttgacattaataaaatatatagaagatgatacg
cagaaggggaaaaagccctttaaatctcttcggaacctgaagatagaccttgatttaaca
gcagagggcgatcttaacataataatggctctagctgaaaaaattaaaccaggcctacac
tcatttatctttgggagacctttctacactagtgtacaagaaagggatgttctgatgact
ttttga
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integrated database retrieval system
