Trichechus manatus latirostris (Florida manatee): 101352965
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Entry
101352965 CDS
T05135
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101352965
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101352965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
101352965
NCBI-ProteinID:
XP_004374273
UniProt:
A0A2Y9DGL0
LinkDB
All DBs
Position
Unknown
AA seq
1827 aa
AA seq
DB search
MARMSLPTLVPLGPDCLRPFTRESLAVIEQRAAEEEARRLRNKQMEIEDAEHKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYCDKKTFIVLNKGKAIFRFSATPALYMLNPFSII
RRGAIKVLIHSLFSMFIMITILSNCVFMTMSDPPPWSKNVEYTFTGIYTFESLIKILAQG
FCIDDFTFLRDPWNWLDFSVIVMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKRLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNNTNTTWYGNDTW
YGNDTWYGNDTWYSNDTWNSRESWVSNFPFDWDAYISDEGNFYFLEGSNDALLCGNSSDA
GHCPEGYKCIKTGRNPNYGYTNYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIF
FVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEAQEKEEEFQQMLQKFKKQQEELEKAK
AAQALEGGEADGDPAHGKDCNGSLDTAPGEKGPPRQSHSTDSAMEELEEAHQKCPPWWYK
CAHTVLIWNCCTPWMKFRRIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVL
TVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRS
FRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECV
CKIAADCSLPRWHMNDFFHSFLIIFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGN
LVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLVHGKVLS
PKEIMLSLGEPCEAMEAGESAPEDEKKELPPEEGDIDLKKDNHILKHMGLADGSPTSVEL
DHLNFINNPYLTIQVPIASEESDLEMPTEDETDTFSEPEDGKQPQPLYDGNSSVCSTADY
KPPEEDPEEQAEENPEGEQPEECFTEACVQRFPCLYVDISQGHGKRWWTLRRACFKIVEH
NWFETFIVFMILLSSGALAFEDIHIEQRPVIRTILEYADKVFTYVFIMEMLLKWVAYGFK
VYFTNAWCWLDFLIVDVSIISLVANWMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVV
NALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDISEVNNKSECE
SLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPKYEVNIY
MYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPQNKIQGMVYDLVMKQAFDITIMILICLNMVTMMVETDDQSQLKVDILYNINM
IFIIIFTGECVLKMFALRQYYFTIGWNIFDFVVVILSIVGLALSELIQKYFVSPTLFRVI
RLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKE
SGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPMLENPGSSVRGDCGN
PSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFYETWEKFDPE
ATQFIDYSRLSDFVNTLQEPLRISKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGD
SGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLLQRSMKQA
SYMYRHSQDSNGEGVPEKEGLIANTMSQMYGQENGNSSVQSKGEKKPSTEDAGPAVGLTP
IGPSNAALPPFQPSRQTVRPGVKESLV
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggccaggatgtctctgcctaccctggtgcctctgggccccgactgcctgcgccccttc
acccgggagtccctggctgtcatagaacagcgggccgcagaggaggaggcccggcggctg
cgcaacaagcagatggagatcgaggatgctgagcacaagccgcgcagtgacctggaggcc
ggcaagaacctgcctctcatctatggggaccccccaccagaggtcatcggcatccccctg
gaggacctggacccctactactgcgacaagaagaccttcatcgtgctcaacaagggcaag
gccatcttccgcttctccgccacgcctgctctctacatgctgaaccccttcagcatcatc
aggcgtggtgccatcaaggtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcttgagcaactgtgtgttcatgaccatgagcgacccacctccctggtccaagaacgtg
gagtataccttcacaggaatctataccttcgagtccctcatcaagatactggcccaaggc
ttctgcattgacgacttcacattcctccgggacccctggaactggctggacttcagcgtc
attgtgatggcgtacctcacagagtttgtggacttgggcaacatctcagccctgaggacc
ttccgagtgctgcgggccctgaaaaccatcacggtcattccaggcctgaagacgattgtg
ggggccctaatccagtcagtgaaaaggctgtcagatgtcatgatcctcaccgtcttctgc
ctgagtgtctttgccctggtggggctgcagctcttcatgggaaacctgcggcagaagtgc
gtgcgctggcccccacccttcaacaacaccaacaccacgtggtacggcaatgacacgtgg
tacggcaatgacacatggtacggcaatgacacgtggtatagcaacgacacatggaacagc
cgtgagagttgggtcagcaacttcccctttgactgggatgcctacatcagcgatgaaggg
aacttctatttcctggagggctccaacgatgccctgctttgtgggaacagcagtgacgcc
gggcactgccccgaggggtacaagtgcatcaagacggggcggaaccccaactatggctac
acgaactacgacaccttcagctgggccttcctggctctctttcgcctcatgacacaagac
tactgggagaacctcttccagctgaccctgcgagcagccggcaagacttacatgatcttc
ttcgtggtcatcattttcctgggctccttctacctcatcaatctgatcttggcagtggtg
gccatggcatatgctgaacagaacgaggccacgctggccgaagcccaggagaaagaagag
gagtttcagcagatgctacagaaattcaaaaagcaacaggaggaactggagaaggccaag
gccgcccaggctctggaaggtggggaggcagatggggacccggcccacggcaaagactgc
aatggcagcctggacacggccccgggggagaaggggcccccgaggcagagccacagcaca
gacagtgccatggaagagctggaagaggcccaccagaagtgcccgccatggtggtacaag
tgcgcacacacagtgctcatatggaactgctgcactccgtggatgaagttcaggcgcatc
atccacctgattgtcatggaccccttcgttgacctgggcatcaccatctgcatcgtgctc
aacaccctcttcatggccatggaacattaccccatgacggagcactttgacaacgtgctc
actgtgggcaacctggtcttcactggcatcttcacggctgagatggtactgaagctgatt
gccatggacccctatgagtatttccagcagggctggaacatcttcgacagcatcatcgtc
accctcagcctggtggaactgggcctggccaatgtgcaggggctgtctgtgctgcgctcc
ttccggctgctacgggtcttcaagctggccaagtcgtggccaacgctgaacatgctcatc
aagatcatcggcaactcggtgggggctctgggcaacctgacgctggtgctggccatcatt
gtgttcatcttcgccgtggtgggcatgcagctgttcggcaagagctacaaggagtgcgtg
tgcaagattgccgccgactgcagcctgccacgctggcacatgaacgacttcttccactcc
ttcctcatcatcttccgcatcctgtgcggggagtggatcgagaccatgtgggactgcatg
gaggtggccggccaggccatgtgcctcaccgtcttcctcatggtcatggtcattggcaat
ctggtggtcctgaacttgttcctggccctgctgctgagctccttcagcgcggacagcctg
gcggcctcagatgaggacggcgagatgaataacctgcagatcgccattgggcgtatcaag
tggggcattggcttcgccaaggccttcctcctgggactggtgcacggcaaggtcctgagc
cccaaggagataatgctcagcctcggggagccctgcgaggccatggaggccggggagagt
gcccccgaggatgagaagaaggagctgccacccgaggagggcgacatagatctgaagaag
gacaatcacatcctgaaacacatgggcttggctgatggctctcccaccagtgtcgagcta
gaccacctcaacttcatcaacaatccctacctgaccattcaggtgcccatcgcgtctgag
gagtcggacctggagatgcccacggaagacgagaccgacaccttctcggagcctgaggat
ggcaagcagccacagcccctctacgacgggaactcctccgtctgcagcacggccgactac
aaaccccctgaggaggaccccgaggagcaggccgaggaaaaccccgagggggagcagccc
gaggagtgcttcactgaagcctgtgtccagcgcttcccctgcctctacgtggacatctct
cagggccatgggaagaggtggtggaccctccgcagggcctgcttcaagattgtcgagcac
aactggttcgagaccttcattgtcttcatgatcctgctcagcagtggggccttggccttc
gaggacatccacatcgagcagcggcccgtcatccgcaccatcttggaatatgccgacaag
gtcttcacctacgtcttcatcatggagatgctgcttaagtgggtggcctacggcttcaaa
gtgtacttcaccaacgcctggtgctggctcgacttcctcatcgtagatgtctccatcatc
agcctggtggccaactggatgggctactcggaactgggacctatcaaatccctgcggacg
ctgagggccctgcgtcccctaagggcactgtcccgattcgagggcatgagggtggtggtg
aatgccctcctgggagccatcccctccatcatgaacgtgttgctcgtctgcctcatcttc
tggctcatcttcagcatcatgggcgtcaacttgtttgccggcaagttctactactgcatc
aacaccactacctctgagaggttcgacatctctgaggtcaacaacaagtccgagtgcgag
agcctgatgcacacgggccaggtccgctggctcaatgtcaaggtcaactacgacaacgtg
ggcctgggctacctctccctcctgcaggtggccaccttcaaaggttggatggacatcatg
tatgcagccgtggactcccgggagaaggaggaacagccaaaatacgaggtgaacatctac
atgtacctctacttcgtcatcttcatcatcttcggatccttcttcaccctcaacctcttc
attggcgtcatcattgataacttcaaccagcagaagaagaagtttggagggaaagacatc
ttcatgacggaggaacagaagaaatactataatgccatgaagaagctgggctccaagaag
cctcagaagccaattccccggccgcagaacaagatccagggcatggtgtatgaccttgtg
atgaagcaggcgtttgacatcacaatcatgatcctcatctgcctcaacatggtcaccatg
atggtggagacggatgaccagagccagctcaaggtggacatcctgtacaacattaatatg
atcttcatcatcatcttcacgggggagtgcgtgctcaagatgttcgccctgcgccagtac
tacttcaccatcggctggaacatattcgattttgtggttgtcatcctgtccattgtgggc
ctggcgctctccgaactgatccagaaatacttcgtgtcaccaacactgttccgtgtgatc
cgcctggcacggattgggcgcatcctacggctgatccgtggggccaagggcatccggacg
ctgctttttgccctcatgatgtcacttcctgccctcttcaacatcggtctcctcctcttc
ctggtcatgttcatctactccatcttcggcatgtccaactttgcctatgtcaagaaggag
tcaggcatcgatgacatgttcaactttgagacctttggcaacagcatcatctgcctcttt
gagatcaccacatcagctggctgggatgggcttctgaaccccatcctaaacagtgggccc
cctgactgtgaccccatgctggagaacccaggctccagtgtcagaggtgactgtggcaat
ccctccattggcatctgcttcttctgcagctacatcatcatctccttcctcatcgtagtc
aacatgtacattgccatcatcctggagaacttcaacgtggccactgaagagagcagcgag
cccctctgtgaggacgacttcgagatgttctatgagacatgggagaagtttgaccctgaa
gctacacagttcattgactacagccgcctctccgatttcgtgaacaccctgcaggagcca
ctgaggatcagcaagcccaacaagatcaaactcatcacactggacctgcccatggtgcca
ggggacaagatccactgcctggacatcctctttgccctgactaaagaggtcctgggggac
tctggggaaatggatgccctcaaacagaccatggaggagaagttcatggcagccaacccc
tccaaggtatcctacgagcccatcaccaccaccctcaagaggaagcatgaggaggtgtgt
gccatcaagatccagagggcctaccgccgacatctgctccagcgctctatgaagcaggca
tcctacatgtatcgccacagccaggatagcaatggggagggggtcccagagaaggagggg
ctgatcgccaacaccatgagccagatgtatggccaggagaacgggaacagcagtgtgcaa
agcaagggtgagaagaagccctcaacagaggatgctggacctgccgtgggactcacaccc
attggcccttcaaacgctgccctccctcccttccaaccatcgaggcagacagtgcgccca
ggggtcaaagagtctcttgtctag
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integrated database retrieval system
