Trichechus manatus latirostris (Florida manatee): 101354001
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Entry
101354001 CDS
T05135
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101354001
Membrane trafficking [BR:
tmu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101354001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
101354001
NCBI-ProteinID:
XP_004377644
UniProt:
A0A2Y9DMW5
LinkDB
All DBs
Position
Unknown
AA seq
1999 aa
AA seq
DB search
MALLVHLKTVTELRGKGDRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDSSE
MLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENHVEVTDTLIDDNNAIIKTSLCVEIRYQA
TDGTLGSWDDGDLLGDESLQEEEKDSQETDGLLPGSRPSSRPPGEKSFRRAGRSVFSAMK
LGKNRLHKEEPQRQDEPAVLEMEDLDHLAIRLGDGLDPDSVSLASVTALTTNVSNKRSKP
DIKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEY
FVFDFHVSPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYLQPEHQFHHKWAILS
DPDDISSGLKGYVKCDIAVVGKGDNIKMPHKANETDEDDIEGNLLLPEGVPPERHWARFY
MKIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNE
QVVFTDLFPPLCKRMKVQIRDSDKVNDMAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMY
GSTRNYTLLDEHQDLNEGLGEGVSFRARLMLALAVEILDTSNLELTSSTEVQVEQTTPVS
ESCTGKIEEFFLFGAFLEASMVDRKNGDKPITFEVTIGNYGNEVDGLSRPQRRRPRKEPG
DEEEVDLIQNSSDDEGNEGGDLASVSSTPPMRPQITDRNYFHLPYLERKPCIYIKSWWPD
QRRRLYNANIMDHIADKLEEGLNDVQEMIKTEKSYSERRLRGVLEELSCGCYRFLSLADK
DQGHSSRTKLDRERLKSCMRELESMGQQAKTLRAQVKRHTVRDKLRLCQNFLQKLRFLAD
EPQHSIPDIFIWMMSNNKRIAYTRVPSKDLLFSMVEEEMGKDCAKVKTLFLKLPGKRGFG
SAGWTVQAKLELYLWLGLSKQRKDFLCGLPCGFEEVKAAQGLGLHSFPPISLVYTKKQVF
QLRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYG
EAHELRDDPPIIVIEIYDQDTMGKADFMGRTFAKPLVKMADEAYCPPRFPAQLEYYQIYR
GNATAGDLLAAFELLQIGPAGKADLPPINSPVDVDRGPIMPVPVGIRPVLSKYRIEVLFW
GLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELLHP
PLNIRVVDCRAFGRYTLVGSHAVSSLRRFIYRPPDHSAPSWNTTVRLLRGCRVLCNGGPS
YHPTGEVVVNMEPEVPVKKLETMVKLDATSDAVIKVDVAEEEKERKKKKKGTAEELEEGE
PDESMLDWWSKYFASIDTMKEQLRQQEASGIDLEEKEEMENTEGLKGLRKAKDKAKALKE
EKKKRTQSPGPGPSQGSEAPEKKKPKIDELKVYPKELESEFDNFEDWLHTFNLLRGKTGE
DEDGSTEEERIVGRFKGSLCVYKVPLPEDVSREAGYDPTYGMFQGIPSNDPINVLVRVYV
VRATDLHPADINGKADPYIAIRLGKTDIRDKENYISKQLNPVFGKSFDIETSFPMESMLT
VAIYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIAQTYSTHGYNIWRDPMTPSQILTR
LCKEGKVDGPHFGPPGRVKVANRVFTGPSEIEDENGQRKPTEEHVSLCALRHWEDIPRVG
CRLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIV
WNTDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFD
YLAAEEKIVISKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGA
KTAKQCSMEMATGEVDVPLVSIFKQKRIKGWWPLLARNENDEFELTGKVEAELHLLTAEE
AEKNPVGLARNEPDPLEKPNRPDTAFVWFLNPLKSIKYLICTRYKWLIIKIVLALLGLLM
LALFLYSLPGYMVKKLLGA
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggccctgctcgttcacctcaagaccgtcacggagctgcggggcaagggcgaccggatt
gccaaagtgaccttccgagggcaatccttctactctcgtgtcctggagaactgtgaggat
gtggctgacttcgatgagacgttccggtggccggtggccagcagcatcgacagcagtgag
atgctcgagattcagatcttcaactacagcaaagtcttcagcaacaagctaattgggacc
tttcgcatggtgctgcagaaggtggtagaggagaaccacgtggaggtgactgacacactg
atcgatgacaacaacgctatcatcaagaccagcctgtgcgtggagatccgatatcaggcc
acagatggcacactgggctcctgggatgatggggacctcctgggggatgagtctcttcaa
gaggaagagaaggacagtcaggagacagatgggctgctgcctggctcccggcccagctcc
cggccgccgggcgagaagagcttccggagagctgggagaagcgtgttttcagccatgaag
ctcggcaagaatcggctccacaaagaggaaccccaaagacaagatgaaccagcagtgttg
gagatggaggaccttgaccacctggccattcggctgggggacgggctggaccccgactct
gtatctctagcctctgtcacagctctcaccaccaatgtctccaacaagcggtctaagcca
gacattaagatggagccaagtgctgggcgacccatggattaccaggtcagcatcacggtg
attgaggctcggcagctggtgggcttgaacatggaccccgtggtgtgtgtggaggtgggc
gatgacaagaagtacacgtctatgaaggagtccactaactgcccctactacaatgagtac
ttcgtcttcgacttccacgtctctcctgacgtcatgttcgacaagatcatcaagatctcg
gtgattcactccaagaacctgctacgaagcggcaccctggtggggtccttcaaaatggac
gtgggaaccgtgtatttgcagcctgaacaccagttccatcacaagtgggccatcctgtct
gaccccgatgacatctcctctgggctgaagggctacgtgaagtgcgacatcgctgtggtg
ggcaaaggggacaacatcaagatgccccacaaagccaatgagacagatgaggatgacatt
gaagggaacttgctgctccctgagggggtgccccctgaacgccactgggcccggttctac
atgaaaatttaccgagcagagggcctgccccgtatgaacacaagccttatggccaatgtg
aagaaggcattcattggtgaaaacaaggacctcgttgacccctatgtgcaagttttcttt
gctggccagaagggcaagacttcagtgcagaagagcagctacgagccactgtggaatgag
caagtggtctttacagacctgttccccccactctgcaaacgcatgaaggtgcagatccgg
gactcggacaaggttaacgacatggccatcggcacccacttcatcgacctgcgcaagatc
tccaatgacggagacaaaggcttcctgcccacgctgggcccagcctgggtgaatatgtat
ggctccacacgtaactacacgctgctggatgagcaccaggacctgaatgagggcctgggg
gagggtgtgtccttccgtgcccgcctcatgctggccctggctgtggagatcctggacacc
tccaaccttgagctcaccagctccacagaggtgcaagtggaacagaccacgcctgtctca
gagagctgcacagggaaaatagaagaattctttttattcggagccttcttggaggcctcc
atggtcgacaggaagaatggagacaagccaatcacctttgaggtcaccataggcaactat
gggaacgaagttgatggcctgtcccgaccccagcggcgtcggccccggaaggagccaggg
gacgaggaggaggtagacctgatccagaattcaagtgatgatgagggcaacgagggtggg
gacctggcctctgtctcttccacgccccccatgcggccccagatcactgacagaaactac
ttccatctgccctacctggagcgcaagccctgtatctacatcaagagctggtggccggac
cagcgccggcgcctctacaacgccaacatcatggaccacattgctgacaagctggaggaa
ggcctgaatgacgtgcaggagatgatcaaaacagagaagtcctactctgagcgtcggctg
cggggtgtcctggaggagctcagctgtggctgctaccgcttcctctccctcgctgacaag
gaccagggccactcctcccgcaccaagctcgaccgcgaacgcctcaagtcctgcatgagg
gagctggagagcatggggcagcaggcaaagaccctgcgagcacaggtgaagcggcacact
gtgcgagacaagctgaggctgtgccagaacttcctgcagaagctgcgtttcctggcagat
gagccgcagcacagcatcccggacatctttatctggatgatgagcaacaacaagcgcatt
gcctacacccgggtgccctccaaggacctgctcttctccatggtcgaggaggagatgggc
aaggactgcgccaaggtcaagacgctcttcctcaagctgccggggaagcgaggctttggc
tcggcgggctggacggtacaggcaaagctggagctctacttgtggctgggtctcagcaag
caacgcaaggacttcctgtgcggcctgccctgtggcttcgaggaggtcaaagcagcccag
ggcctgggcctgcactccttcccacccatcagcctggtctacaccaagaagcaggtgttc
cagctccgggcccacatgtaccaggcgcgcagcctctttgctgcagacagcagcggcctc
tctgaccccttcgccagggtcttcttcatcaatcagagtcagtgtacagaggtgctgaat
gagaccctgtgccccacctgggaccagatgctggtgttcgacaacctggagctgtatgga
gaagctcatgagttgcgagacgacccccccatcattgtcattgaaatctatgaccaggac
accatgggcaaagctgacttcatgggccggaccttcgccaagcctctggtgaagatggca
gatgaggcgtattgcccaccccgcttcccggcccagctcgagtactaccaaatctaccga
ggcaacgccacggctggagacctgctggctgccttcgagctgctgcagattgggccagca
gggaaggccgacctgccccccatcaacagcccagtggacgtggaccggggccccatcatg
cctgtgcctgtgggcatccggcccgtgctcagcaagtaccgaatcgaggtgctgttctgg
ggcctgagagacctgaagcgcgtgaacctggcccaagtggaccggccgagggtggacatc
gagtgtgcaggaaagggggtgcaatcgtccttgatccacaattacaagaagaaccccaac
ttcaataccctcgtcaagtggtttgaagtggacctccccgaaaacgagctgctgcacccg
cccttgaacatccgcgtggtagactgccgggcctttggccgctacaccctggtgggctca
cacgccgtcagctccctgcggcgcttcatctaccggcccccggaccactcggcccccagc
tggaacaccacagtcaggcttctccggggctgccgtgtgctgtgcaatgggggcccctcc
tatcaccccacaggggaggtcgtggtgaacatggagccagaggtgcctgtcaagaagctg
gagaccatggtgaagctggatgcgacgtctgacgccgtcatcaaggtggatgtggctgaa
gaggagaaggagaggaagaagaagaagaagggcactgcagaagagctggaggagggggag
cctgatgagagcatgctagactggtggtccaagtacttcgcctccattgacaccatgaag
gagcaacttcgacagcaagaggcctcaggaattgacttggaggagaaggaggagatggag
aacactgaaggcctgaaggggctgaggaaggccaaggacaaggcgaaggccttaaaggag
gagaagaagaagaggacccagagccctggccccggccccagccaagggtctgaggcccct
gagaagaagaaacccaagattgacgagcttaaggtgtaccccaaggagctggagtcggag
ttcgacaactttgaggactggctgcacactttcaacctgctgcggggcaagacgggggag
gacgaggatggctccaccgaggaggagcgcattgtgggccggttcaagggctccctctgc
gtgtacaaagtgccgctcccagaggacgtgtcccgggaagctggctacgaccccacctat
ggcatgttccagggcatccccagcaatgaccccatcaacgtgctagtccgagtctatgtg
gtccgggccacagacctgcaccccgcagacatcaatggcaaggctgacccctacatcgcc
atccggctgggcaagactgacatccgtgacaaggagaactacatctccaagcagctcaac
cctgtctttgggaagtcctttgacatcgagacctccttccccatggagtccatgctgacg
gtggccatctacgactgggatctggtgggcacggacgacctcattggggaaaccaagatc
gacctggagaaccgcttctacagcaagcaccgcgccacctgtggcatcgcccagacctac
tccacacatggctacaacatctggcgggaccccatgacgcctagccagatcctgacccga
ctctgcaaggagggcaaagtggatggcccccactttgggccccccgggagagtaaaggtg
gccaaccgcgtcttcacagggccctcagagatcgaggatgagaacggtcagaggaagccc
acggaggagcacgtgtcgctgtgcgccctgagacactgggaggacattccccgcgtgggc
tgccgcctggtgcctgaacacgtagagacgcggccactgctcaaccctgacaagcctggc
atcgagcagggccgcctggagctgtgggtggacatgtttcccatggatatgccggccccc
gggacgcctctggacatctcgccccggaagcccaagaagtatgagctgcgggttatcgtg
tggaacacggacgaggtggtcctggaggacgacgacttcttcactggcgagaagtccagt
gacatctttgtgcgggggtggctgaagggccagcaggaggacaagcaggacacggatgtc
cactaccactccctcactggcgagggaaacttcaactggcgctacctgttccccttcgac
tacctggcagccgaggaaaagattgtcatctccaagaaggagtccatgttctcctgggac
gagacggaatacaagatccctgcacggctcaccctgcagatctgggatgcggaccacttc
tctgcagacgacttcctgggggccatcgagctagacctgaaccggttcccacggggcgcg
aagacggccaagcagtgctccatggagatggccacgggggaggtggacgtgcccctggtt
tccatcttcaagcagaagcgcatcaagggctggtggcccctcctggcccggaatgaaaat
gatgagtttgagctcacgggcaaggtagaagcggagctgcatctactgacggccgaggag
gcagagaagaatccagtgggcctggcccgcaatgagcctgacccactagagaagcccaac
cggccagacaccgccttcgtctggttccttaaccctctcaagtccatcaagtacctcatc
tgcacccgctataagtggctcatcatcaagatcgtgctggccctgttgggactgcttatg
ctggccctcttcctctacagccttcctggttacatggtcaagaagctcctaggggcctga
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integrated database retrieval system
