Trichechus manatus latirostris (Florida manatee): 101355447
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Entry
101355447 CDS
T05135
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04360
Axon guidance
tmu04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101355447
09158 Development and regeneration
04360 Axon guidance
101355447
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmu01009
]
101355447
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101355447
Protein phosphatases and associated proteins [BR:
tmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101355447
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101355447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
Motif
Other DBs
NCBI-GeneID:
101355447
NCBI-ProteinID:
XP_004379840
UniProt:
A0A2Y9DSQ1
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHSRRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNLGYKKKACHGPPLIRTMPRASGAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIVQQHYMWQDIRYSQMEKEKAEACSQSEI
NLSEVELGEARGAAQSRECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgtactacaaaaaggtcaactactcaccgtaccgggaccgcatacccctg
caaattgtgagagctgagacagagctctctgcggaggagaaggccttcctcaatgctgta
gagaaaggggactacgccacagtgaagcaggccctacaggaggccgaaatctactacaat
gtcaacatcaactgcatggaccctctgggtcggagtgccctgctcattgccattgagaac
gagaacttggagattatggagctactgctgaaccacagcgtgtatgtgggcgatgcattg
ctctatgccatccgcaaggaagtggtgggtgctgtggagcttcttctcagctacaggcgg
cccagtggagagaagcaggttcccactctgatgatggacacccagttctcagaattcaca
ccggacatcactcctatcatgctggccgcccataccaacaactatgaaatcatcaaattg
cttgtccaaaaacgggtcacgatcccacggccccaccagatacgctgcaactgtgtggag
tgtgtgtccagttcagaggtagatagcctgcgccactcccgctcccggctaaacatctat
aaggctctggcaagtccctcactcattgccttatcaagcgaggaccctattctaactgct
ttccgcctgggctgggaactcaaggagctcagcaaggtagagaatgagttcaaggctgag
tatgaagagctctcccagcagtgcaagctctttgccaaagacctgctggaccaagctcgg
agctcccgggaactggagatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcagaagtaccatgacctggccaagctgaaggtggcaatcaaataccaccagaaagag
tttgttgctcagcctaactgccaacagttacttgccaccctatggtatgatggcttccct
ggatggcggcggaaacactgggtagtcaagcttctgacctgcatgaccattgggttcctg
tttcccatgctgtccatagcctacctgatctcacccaggagcaaccttggactgttcatc
aagaaaccctttatcaagtttatctgccacacagcatcctatctgaccttcctcttcatg
cttcttctggcttctcagcatattgtcaggacagatctccatgtacaaggcccgcctcca
actgtcgtggaatggatgatattgccttgggttctaggtttcatttggggggaaattaag
gaaatgtgggatggtggatttactgaatacatccatgactggtggaacctgatggatttt
gcaatgaattcactctacctggcaacgatttccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaggaatgggaaatgtggcacccgaccctgattgcagaagca
ctctttgcgatatccaacattttaagttcgttgcgtctcatatccctgttcacagccaac
tcccacttagggcctctgcagatctctttggggcgcatgctgctggatatcctcaaattc
ctctttatctactgcctggtactgctggcctttgccaacggattgaaccagctttacttt
tattatgagaccagagctatcgatgagcctaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacgctctttgaaacccttcagtcactcttctggtctgtattc
ggccttttaaatctctatgttactaacgtgaaagccagacacgagttcacagagtttgtg
ggagctaccatgtttgggacatacaatgtcatctctctggtagtgctactgaacatgctg
attgccatgatgaacaactcctaccagcttattgccgatcatgctgatatcgagtggaag
tttgcaaggacaaagctctggatgagttattttgatgaaggtggcaccttgccacctcct
ttcaacatcatccccagtcccaagtcatttctataccttggtaactggttcaacaacacc
ttctgccccaaaagagaccctgatggtagacggagaaggcacaacctaagaagcttcaca
gaacgccatgctgacagcctgatacagaatcaacattaccaggaagttatcaggaattta
gtcaaaaggtatgtggctgctatgataagaaattccaaaacaaatgagggattgacagaa
gaaaattttaaggaattaaagcaggacatctccagctttcgatatgaagtgcttgacctc
ttaggaaataggaaacactcaaggagaagcttttccactagcagcactgaactctctcag
agggatgataccaatgatggcagtggtggggctcgggccaaatccaagagtgtctctttc
aatttaggctacaagaaaaaggcctgccacgggccacctctcatcagaaccatgccaaga
gccagtggtgcccaaggaaagtcaaaagctgagtcatcaagcaaacgctccttcatgggt
ccttcactcaagaaactgggtcttctgttctccaagtttaatggtcatatgtctgaacct
agttcagagccaatgtacacaatttctgacggaattgttcagcagcactatatgtggcag
gacatcagatattctcagatggagaaagagaaagcagaggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagccaggggagctgctcagagcagggaatgtcct
ctagcctgttccagctctcttcactgcgcatccagcatctgctcctcaaattccaaactt
ttagactcctcagaggatgtatttgaaacttggggagaggcttgtgacttgcttatgcac
aaatggggtgatggacaggaagaacaagttacaactcggctctaa
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integrated database retrieval system
