Trichechus manatus latirostris (Florida manatee): 101359495
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Entry
101359495 CDS
T05135
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04360
Axon guidance
tmu05017
Spinocerebellar ataxia
tmu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101359495
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101359495
05022 Pathways of neurodegeneration - multiple diseases
101359495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101359495
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101359495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
101359495
NCBI-ProteinID:
XP_004386905
UniProt:
A0A2Y9E4Q2
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MSTKVRKCKEQARVTFSAPEEEVEEEGEEEGAEPQRRRRGWRGVNGGLEPRSATSQRQPP
GYCPPPFSPGPDMSVEGSPSLRRTTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDA
AEYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDAL
LLAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIIL
AAHCQKYEVVHMLLMKGARIERPHDYFCKCGECTEKQRHDSFSHSRSRINAYKGLASPAY
LSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAI
LNGDLESAEPLEVHRHKSSLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTI
AIKFLVVLVVALGLPFLAIGYWVAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASD
RFEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYIL
QLWNVLDFGMLSVFIAAFTARFLAFLQATKAQQYVDSYIQESDLSEVTLPPEIQYFTYAR
DKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIM
VFLAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENI
GYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPP
FSLVPSPKSFVYFIMRIINFSRCRRRRLRKDIEMGMGNSKSRLNLFTQSNSRVFESHSFN
NILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQAT
EELAVLIHKLSEKLNPSMLRCE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgcaaggagcaagcgagggtgaccttctcagcgcccgag
gaggaggtggaggaggagggcgaggaagagggtgcggagccgcaacgccgccgccggggc
tggaggggcgtcaacggggggctggagccgcgctcggcgacctcccagcggcagccgccg
ggctactgcccgccacccttctccccgggacccgacatgtcggtggagggaagcccgtct
ctgaggcgcacgacggtgatgcgggagaagggccggcgccaggccgtccggggcccggcc
ttcatgttcaatgaccggggcaccagcctcaccgccgaggaggagcgcttcctcgacgcc
gccgagtacggcaacatccccgtggtgcgcaagatgctggaggagtccaagacgctgaac
gtcaactgcgtggactacatgggccagaacgcgctgcagctggccgtgggcaacgagcac
ctggaggtgactgagctgctgctcaagaaggagaacctggcgcgcatcggcgacgccctg
ctgcttgcaattagcaaaggctacgtgcgcatcgtggaggccatcctcaaccacccgggc
ttcgcagccagcaagcgcctgaccctgagcccctgcgagcaggagctgcaggacgacgac
ttctatgcttacgacgaggacggcacgcgcttctcgcccgacatcacccccatcatactg
gcggcgcactgccagaagtacgaggtggtgcacatgctgctgatgaagggcgcccggatc
gagcggccgcacgattacttctgcaagtgcggggagtgcacggagaagcagcggcatgac
tccttcagccactcccgctccaggatcaacgcctacaaggggctagccagcccggcttac
ctgtccctgtccagcgaggaccccgtgctcacggctttggagctcagcaacgagttggcc
aagctggccaacatagagaaggagttcaagaatgactatcgaaagctctccatgcaatgc
aaagactttgtagtgggcgtgctggatctttgccgagactccgaagaggtggaagccatt
ctgaatggagatctggaatcagcagagcctctggaggtgcacaggcataaatcttcattg
agtcgtgtcaaacttgccattaagtatgaagtcaaaaagttcgtggctcaccccaactgc
cagcagcagctgttgacgatctggtatgagaacctgtcgggcctgcgggaacagaccata
gctatcaagtttctggtagtgctggtggtagccttgggccttccgttccttgccatcggc
tactgggtcgcaccttgcagcaggctggggaaaattctgcgaagcccttttatgaagttt
gtggcgcatgctgcttccttcatcatcttcctgggcctgcttgtgttcaatgcctcggat
aggttcgaaggcatcaccacgctgccaaatatcactgtcattgactatcccaaacagatc
ttcagggtgaaaaccacccagttcacatggactgaaatgctaattatggtttgggttctt
ggaatgatgtggtcggaatgtaaggagctctggctggaaggacctagggaatacattttg
cagttgtggaatgtgcttgactttgggatgctctccgtcttcattgctgctttcacggcc
agattcctagctttccttcaagcaactaaagcacaacagtatgtggacagttatatccaa
gagagcgacctcagtgaagttacacttccaccagagatacagtatttcacttatgctaga
gataaatggctcccttctgacccccagatcatatctgaaggcctctatgccatcgctgtc
gtgctcagcttctctcggatcgcgtacatcctccctgcaaatgagagctttggcccctta
cagatctctcttggaaggactgtaaaggacatattcaagttcatggtcctctttattatg
gtctttcttgcctttatgattggcatgtttatactttattcttactaccttggggctaaa
gtaaacgctgcatttaccaccgtagaagaaagtttcaagactttgttttggtcaatattt
gggttgtctgaagtgacttccgttgtgctcaaatacgatcacaaattcatagagaatatt
ggatatgttctttatggaatatacaatgtaacgatggtggttgttttactcaacatgcta
attgctatgatcaatagctcatatcaagaaattgaggatgacagtgacgtcgaatggaag
tttgctcgttcaaaactttggttatcctattttgatgatggaaaaacattacctccacct
ttcagtctagttcctagtccaaaatcgtttgtttatttcatcatgcggatcattaacttt
tccagatgcagaaggagaaggttacggaaggacatagaaatgggaatgggtaactcaaag
tccaggttaaacctcttcactcagtctaactcaagagtttttgaatcacacagttttaac
aacattctcaatcagccaacacgttaccagcagataatgaaaagacttataaagcgctat
gttctgaaagcacaagtagacaaagaaaatgatgaagttaatgaaggcgaattaaaagaa
atcaagcaagatatttccagtcttcgttatgaacttttggaggacaagagccaagcaact
gaggagttagccgttcttattcataaactcagtgagaaactgaatcccagcatgctgaga
tgtgaatga
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integrated database retrieval system
