Trichechus manatus latirostris (Florida manatee): 101359794
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Entry
101359794 CDS
T05135
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101359794
03012 Translation factors [BR:
tmu03012
]
101359794
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101359794
5.6.2.6 RNA 3'-5' helicase
101359794
Spliceosome [BR:
tmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101359794
Translation factors [BR:
tmu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101359794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
nSTAND3
ResIII
AAA_19
ATPase
AAA_14
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
101359794
NCBI-ProteinID:
XP_023583882
UniProt:
A0A2Y9QPD9
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MGDVKNFLYAWCGKKKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEDVPAVGIAPPPPSLTDSSDGTASTDGSLPTTMGGPLPPHLAL
KAENNSGVGASGYGVSGPTWDRGANLKDYYSRKEEQEAQATLESEEVDLNAGLHGNWTLE
NAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAA
QSCALSLVRQLYHLGVIEAYSGLTKKKEGETLEPYKVNLSQDLEHQLQNVVQELNLEIVP
PPEDPSVPVLLNIDKLAHFEPSQRQNQMGVVPWSPPQSNWNPWTSSNIDEGPLAYATPEQ
ISTDLKNELMYQLEQDRNLQGILQERELLPVKKFENEILDAISQNSVVIIRGATGCGKTT
QVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESIL
PRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRI
VLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTHFIPPPKDKKKKDKDED
GGEEDDANCNLICGDEYGPETRMSMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPG
WNLIYTMQKHLEMNAHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETS
ITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSR
ARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLREL
DALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKR
LGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQ
LKEILINSGFPEECLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRN
ALIHKSSVNCPFSSQDMKYPCPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDG
QLVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQPDIISQLDPANERMLNMIRQIS
RPSAAGITLMIGSVRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYGSGGYGSGGY
GGGGGGYGGGGYGGGSNSYRGGYGGGGGGGFRGGSYRGGSGGDYRGSGGGGYRGSGGFHR
GGGRGGFGGGYFGQGRGGGGY
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgttaaaaatttcctgtatgcctggtgtggcaaaaagaagatgaccccatcc
tatgaaattagagcagtggggaacaaaaacaggcagaaattcatgtgtgaggttcgagtg
gaagggtacaattatacaggcatgggcaattccaccaataaaaaagacgcacaaagcaat
gctgccagagactttgttaactatttggttcgaataaatgaagtaaaaagtgaagacgtc
ccagctgttgggatagcaccacctccaccttcacttactgattcttccgatggcacagca
agtactgatggaagtttacccacaaccatgggaggaccacttcctccacatctggccctc
aaggcagaaaataattctggagttggagcctctggctatggtgtgtctgggcccacctgg
gatcggggagccaacttaaaggattactactcaaggaaggaggaacaagaagcacaagcg
actctagaatcggaagaagtggatttaaatgctgggcttcatggaaactggaccttggaa
aatgctaaggctcgtctgaaccaatatttccaaaaagaaaagattcaaggagaatataag
tacacccaagtgggtcctgatcacaacaggagttttattgcagaaatgaccatttatatc
aagcagctgggcagaaggattttcgcacgtgaacatggatcaaataagaaactggcagca
cagtcctgtgccctgtcgcttgttaggcaactctaccatcttggagtgattgaagcgtac
tctggacttacaaagaagaaagaaggagagacattggagccctacaaagttaacctctct
caagacttggagcatcagctgcaaaacgtcgttcaagagctgaatcttgagatcgtgcca
ccacctgaggatccgtctgtgccagttttactcaacattgacaaactggcacactttgaa
ccatctcagcgacaaaatcaaatgggtgtggttccttggtcacctccacaatccaactgg
aatccttggactagtagcaacattgatgagggccccctggcttatgctactccagaacaa
ataagcactgacctcaagaatgaactaatgtaccagttggaacaggatcgtaatttgcaa
ggaatcttgcaggagagagagttactgcctgtgaagaaatttgaaaatgaaatcctggac
gcaattagtcaaaattcagttgtcattattcgaggtgctactggatgtggtaaaaccaca
caggtgccgcagttcattctagatgactttatccagaatgaccgagcagcagagtgtaat
attgtagtaactcagcccaggagaatcagtgcagtgtctgtggcagagcgagttgcatat
gagagaggagaagagcctggaaaaagctgtggctatagtgttcgatttgagtctatactt
ccccgtcctcatgccagtataatgttttgtactgtaggtgtgctcctaagaaaactggaa
gcaggcattcgaggaatcagtcatgtgattgtggatgaaatacacgaaagagacattaat
actgacttcctcttggtagtgctgcgtgatgtggttcaggcttaccctgaagttcgcatt
gttctcatgtctgcaactattgataccagcatgttctgtgaatatttcttcaattgcccc
attattgaagtttacggaaggactttcccagttcaagaatattttctggaagactgtatt
cagatgacccactttattcctcccccaaaagacaagaagaagaaggataaggatgaagat
ggtggtgaggaggatgatgcaaattgcaacctgatctgtggtgatgaatatggtccagaa
acaaggatgagcatggctcagttgaatgaaaaagaaactccttttgaactcatcgaggct
ctgcttaagtacatcgagactcttaatgttcctggagctgtgttggtttttctgcctggc
tggaatctcatttatactatgcagaagcatttggaaatgaatgcacattttgggagccat
cggtatcagattctccctctgcattctcagattccccgagaggaacagcgcaaagtgttt
gatccagtaccagtgggagtaaccaaggttattttgtccacaaatattgccgagacaagc
attactataaatgatgttgtttatgtcattgattcctgcaagcagaaagttaagctgttt
actgctcacaacaacatgaccaactatgctacggtatgggcatccaaaacaaaccttgag
cagcggaaagggcgagcaggccgtgtacggcctggattctgctttcacctctgcagccga
gctcgttttgagagacttgaaacccacatgacaccagagatgttccgaacaccattgcat
gaaattgctttgagcataaaacttcttcgtctgggaggaattggtcagttcctggccaag
gccattgaacctccacctttggatgctgtcattgaagcagagcacactctcagagagctt
gatgcgttagatgccaatgatgagttgactcctctgggacggatcctggctaaactcccc
attgagcctcgttttggcaaaatgatgataatggggtgtattttctatgtgggagatgct
gtctgtaccatctctgctgccacctgctttccagagcctttcatcagtgaaggaaagcga
ctgggttatatccatcgaaattttgctggaaacagattttctgatcatgtggccctttta
tcagtattccaggcctgggatgatgctagaatgggtggagaagaggcagagatacgtttt
tgtgagcacaaaagactcaatatggctacactaagaatgacttgggaagccaaagttcag
ctcaaagagattctgattaattctggatttccagaagaatgtttgctgacacaagtgttt
actaacactggaccagataataatttggatgttgttatctctctcctggcctttggtgta
tatcccaatgtgtgctatcataaggaaaagagaaagattctcaccactgaaggacgtaat
gcacttatccacaagtcttctgttaattgtccctttagcagccaggacatgaagtaccct
tgtcccttctttgtatttggtgaaaagattcgaacccgagccatctctgctaaaggcatg
accttggtgacccctctgcagttgctactcttcgcctccaagaaagtccaatctgatggg
cagcttgtgcttgtagatgactggatcagactgcaaatatcccatgaagctgctgcctgc
atcactgctctccgggcagctatggaggctctggttgttgaagtaaccaaacagcctgac
atcatcagccagttggaccctgcaaatgaacgaatgctcaacatgatccgccaaatctct
aggccctcggctgctggcatcacccttatgattggtagtgtacggtatggagatggtcca
cgtcctcccaagatggcccgatatgacaatggaagtggatatagacggggcggttctagt
tacagtggtggaggctatggtggtggttatggcagtggaggctatggtagtggaggctac
ggaggtggtggaggaggctacggtggcggcggctatggtggtggctccaactcctatcgg
ggaggatatggtggaggtggtggtggaggctttagaggaggtagctatagaggaggttct
ggaggagactacagagggtctggtggaggaggttacagaggctcggggggattccataga
gggggtggcagggggggctttggaggtggctactttggacaaggaagaggaggtggtggc
tattaa
DBGET
integrated database retrieval system
