Tetraodon nigroviridis (spotted green pufferfish): GSTEN00004541G001
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Entry
GSTEN00004541G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GSTEN00004541G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00004541G001
Enzymes [BR:
tng01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
GSTEN00004541G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GSTEN00004541G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
CAF90308
UniProt:
Q4T9X4
LinkDB
All DBs
Position
undetermined
AA seq
482 aa
AA seq
DB search
MEERQNGSLPVVSPEYLHQWVQSAQQFQALQAQYSGAYPTPHFHNPEGPSGLGPLLSTFH
PEAPGQEEEAAQPAKPAAKKRGRPAQPKEPKPPKVPREPKPPKVPKEPKPPKAPKEPKPP
KVPKEPKPPKAPKDPNAPKAKPGPKPKKGAGADAAADGKQEKIDENFKKVKRKVDRFKGM
TEEEVMKKTLPDLLDYNPGLRHHRNQPGPDGCLHRTLVSGPRESFLSSSTTCMTPHLPGK
YRMGFTNMVARATPGSKDLSSKELREGGKILVEKLKKFKPLIAVFNGKCIYEMFCRELFG
KKPQKLEFGLQPHKIPDCDVRPCAQFPRAQDKVHFYINVRELRDQLKGVERRGEIEEVAY
SFDLDLAKEDAKRMAIKEEQYDPGYEDATEEPMQRAELEKARARSTGTAPSPQVNLQVRF
RSSAATVLCDPHERPTNRKGPSKGPGVVLPPPESACVVCLQMLLGRKTRRQPQRAASRTD
GG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaggcagaacggatccctcccggtggtctccccggagtacctccatcagtgg
gttcagtctgctcagcagtttcaggctctccaagctcagtattcaggcgcttatcccacc
cctcacttccacaacccggagggcccctcaggtctggggccgctgctcagcacgtttcat
ccagaggcccctgggcaggaggaggaagccgcccaacccgcaaaacctgcagccaaaaag
agagggagaccggcccaacccaaggaacccaaacctccgaaggtccccagggaacccaaa
cctccaaaggtccccaaggaacccaaacctccgaaagcccccaaggaacccaaacctccg
aaggtccccaaggaacccaaacctccgaaagcccccaaggacccgaacgcgcccaaagcc
aaacccgggcccaagcccaagaagggcgccggcgccgatgcagccgcagacggcaaacag
gagaagatcgacgagaacttcaagaaggtgaagagaaaagtggaccgcttcaaagggatg
acggaggaggaggtgatgaagaaaacgctgccagacctgctggactacaaccctggacta
cgtcatcatcggaatcaacccgggcctgatggctgcctacatcggacgctggtttccggg
ccccgggaatcatttttgagcagctcaaccacatgcatgacaccacacctgccgggcaag
tacaggatgggcttcaccaacatggtggccagggccacgccgggcagcaaggacctctcg
agtaaagaattacgggaaggaggcaaaatccttgtggagaagctgaagaaattcaagcct
cttattgcagttttcaatggcaaatgtatctatgaaatgttctgccgggagctctttggg
aagaaaccacagaagctggaatttggcctgcagcctcataagatccccgactgcgacgtg
cggccctgcgctcagttcccccgcgcccaggacaaagtccacttctacatcaacgtgcgc
gagctgagggaccagctgaagggcgtggaacgaaggggcgagatcgaggaggtggcgtac
tcctttgacctggacctggccaaagaggacgccaagaggatggccattaaggaggagcag
tatgaccccggctacgaggacgctacggaggagcctatgcagagggcggagctagagaag
gccagagccaggtcaacgggcactgcaccttctcctcaggtgaaccttcaggtaaggttc
aggagctcagctgccaccgtgctttgtgaccctcacgagcgcccaacaaacaggaaagga
ccctcaaagggccccggggtggtcctcccgccgccagagtcagcgtgtgtcgtctgtctg
cagatgctcctcgggagaaagacgcgtcgccagccgcagagggcggcgtccaggacggac
ggtggatga
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