Tetraodon nigroviridis (spotted green pufferfish): GSTEN00005042G001
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Entry
GSTEN00005042G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09446
interferon regulatory factor 5
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
GSTEN00005042G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00005042G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
GSTEN00005042G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-ProteinID:
CAF90666
UniProt:
Q4T8W6
LinkDB
All DBs
Position
undetermined
AA seq
481 aa
AA seq
DB search
MSFQPRRIRLKPWLLAQVDSGRYPGLQWVSQDHRLFQVPWKHATRHTPAAEEEVTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVRPYKIYEVCQQPGDA
DAADDEDEEMPDLMHLTISESQQLVLPAGVGAGPGFIQDGGSSGSASTGSYLALPDLGGF
GPCAAGPSGPAGATSDLQSQMETGSCFGAGRIQDFSVLPELDPSENAMEAPQDLVDPQNQ
QPVKYDLLSSVPLTDLELKFQYRGRLVGSHTVSNPQGCRLYYGQLEPRPDQVDLLGPVSL
QQVQFPGTSDIQNHRQRHYTETVLAVMERGLILEIWEQDIYAIRLCQSKVFWSGPAVPDR
GPPNPLEREERVRVFSLNQFLEGLIRFQKGEVTQPPPFEIHFCFGEDWPDGRPKEKKLIM
VQVVPVVARMLTEMFSGELNWSTDSLRLQISNPDIKDQTVEQFKELQRLMQSHNILGPWA
L
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccagcctcggcggatccgtctgaagccctggctcctggcccaggtggacagc
ggcaggtatcctggcctccagtgggtcagccaggaccaccggctcttccaggtcccctgg
aaacacgcaacccgacacacgccggcagcggaggaggaggtcaccatcttcaaggcctgg
gccctggagacaggcaaataccaggagggcgtggacgagccggaccccgccaagtggaag
gccaacctgcgctgcgccctgaacaaaagccgggagttccagctgaagtacgacggcacc
aaggagacgccggtcaggccctacaagatctacgaggtgtgccagcagccgggggacgca
gacgccgccgatgacgaggacgaagagatgcccgacctgatgcacctgaccatcagcgag
tcccagcagttggtccttcctgctggggtgggggcggggccaggcttcattcaggatggc
ggttcttcaggctccgcctccacgggctcctatctggcgctgcccgacctcggtggattc
ggcccgtgtgctgctgggccttcgggaccggccggagcgacctccgacctccagtcccag
atggagaccggcagctgctttggggccggcagaatccaggacttcagtgttctgcctgaa
ctggacccctcggagaacgccatggaggcaccccaggacctggtggaccctcagaaccag
caacccgtcaagtacgacctgctgagcagcgtcccacttacagatctggagctgaagttc
cagtaccggggcaggctggtgggctcccacaccgtcagcaacccccagggctgccgcctc
tactacggacagctggaaccccgcccggaccaggtggacctgctgggacccgtcagcctg
cagcaggtccagttcccgggaacctccgacatccagaaccacaggcagcggcactacacg
gagacggtgctggcggtgatggagcgcggcctgatcctggagatctgggagcaggacatc
tacgccatccgcctctgccagagcaaggtgttctggtccggaccggccgtcccggaccgg
ggtccgcccaacccgctggagcgagaggagcgcgtcagagtcttcagcctcaaccagttc
ctggaaggactgatccgcttccagaagggcgaagtcacgcagccgcctcccttcgagatc
cacttctgcttcggggaggactggcccgacgggaggcccaaggagaagaagctcatcatg
gtccaggtggtcccggtggtggctcggatgctgacggagatgttctcgggcgaactcaac
tggtccaccgacagcctgcgcctgcagatctccaaccccgacatcaaggaccagacggtg
gagcagttcaaggagctgcagaggctgatgcagagccacaacatcctgggaccctgggcg
ctg
DBGET
integrated database retrieval system
