Tetraodon nigroviridis (spotted green pufferfish): GSTEN00011646G001
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Entry
GSTEN00011646G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K27393
filamin-C
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00011646G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tng04812
]
GSTEN00011646G001
Cytoskeleton proteins [BR:
tng04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
GSTEN00011646G001
Intermediate filaments
Intermediate filament-binding proteins
GSTEN00011646G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
Motif
Other DBs
NCBI-ProteinID:
CAF95123
UniProt:
Q4SW59
LinkDB
All DBs
Position
undetermined
AA seq
2871 aa
AA seq
DB search
GEEEEEEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVNKRIADLQKDLSDGLRLI
GLLEVLSQKKMFRKFHCRPNFRQMKLENVSVALEFLEREHIKLVSIEQLTTAAKKRRPQR
GLQRPQQDLGQMNPDDLISGWSVGPAAGLMWTCLDPGLTCDGVRDSKAIVDGNLKLILGL
IWTLILHFSISMPMWGDEDDEDAKKLTPKQRLLGWIQNKVPQLPITNFHRDWRDGKALGA
LVDNCAPGLCPDWETWDPSQPVENAREAMQQADDWLGVPQVIAPEEIVDPNVDEHSVMTY
LSQFPKAKLKPGAPLRAKTLHPRRAKAYGPGKYSTHSVESRGNVVLKPAEFLVETVEAGL
GEVLVYVEDPEGHTEEARVTPNNDKNRTYSVVYLPKVEGFHQVKVLFAGQDIDRSPFRVN
VSKAMGDPTRVQARGPGLQQTGNVAGKPTYFDIYTAGAGAGDVGVILVDSNGRRDTVEIV
LENRGDSVFRCTYIPVLEGLHMVHVTFAGQQIPRSPFAAHISEAPQSVHSPRSPVECGPS
IRTSPPDKIKRGPPPTPPKPRRPTCNPNACRASGRGLQPKGVRVKEVADFKVYAKGSGSG
ELKVVVKGPRGAVEPVKVVEMGNDMFECSYYPVSRGKYVVTISWGGHNIPRSPFEVHVGE
EAGPQKVRAWGPGLETGMVGKSADFVVEAIGTEVGTLGMSRLGAGLERFTADSQRLSWRC
EMKLPLTAGFSIEGPSQAKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMA
HVLSAANDTFPENVKCSGPGLEPLGCIINKPAEFTMDTRGAGRGELKLYAQMLGMGFLFQ
DAEGFPINIQMTENENRTFFCVYVPTKAIKHTIIITWAGVTVPNSPFRVMVGEGSHPENV
KVYGPGVERLGLKANEPTYFTVDCSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDND
TFTVKYTPPGSGQYTIMVLFADQVRGCTGELFHSVPSCFLSTNALHFMFKQQIPISPFRI
KVEPSHDAAKVRAEGPGLNKTGVEVNKPTHFTVYTKGAGKAQPEVHFTAAGKGSVVQDFE
IIDNHNYSYTVRYTAVQQGNMSIAVCHGGDPIPKSPFHIMVAPLLDLSKVSVQGLNSKAD
VGKDEDFTVRTQGAGGQGRLDVKILSPSRRPIPCKLESGVNNEVYTVTYIPPEEGAYRVD
ISYDGNPVPGSPFAVEGVLPPDALKVRAYGPGLQGGLVGKPAPFAIDTKGAGTGGLGLTV
EGPCEAKIECQDNGDGSCSVSYLPTEPGEYAINILFAEQHVPGSPFKAVVQSLFDPSMVT
VSGPGLERGKVNEDGSFTVDCSKAGDAELTIEIVSESGAKAEVHVQNNRDGTYSITYIPL
FQGLYTITIKYGGCAVPNFPSRLLVDPAVDTTGVKVYGPGVEPRGVLREVTTHFIVDAQC
FYMGGGDHIKACVSNPSGATTDAYITDKGDGTYRVEYTPHEDGLHLIEVLFDEVLLPKSP
FRVLVTEGCDPSRVRAYGPGLEEGLVNATNCFTVETRGAGTGGLGLAIEGPSEAKMSCKD
NKDGSCTVEYIPFNSGEYDVNITFGGLPIPGSPFSVPVRELVDPSKVRCFGPGLEIGVRA
HVPQTFTVDSSKAGLAPLVVQLYGPTGVAEPITVTDNNDGTHTANYSPANDGPYTVCVKY
ADQEVPCSPFKIKTLPAHDASKVRASGPGLNASGITASLPVEFTIDARDAGEGLLTVQIL
DPEGKPKRANIRDNWNGTYTVSYVPDMTGRYTITIKYGGDEIPYSPYCIHAIPTGDASKC
LVTVSIGGHGPGSGIGPTIQIGEETVITVDAKAAGKGKVTCKVTTPDGAELDVDVVENAD
GTFDVYYTAPEPGKYVITIRFGGENIPNSPFHVVVEKGIRFFLKFLMLDVLLNGERVEML
AKEVMWSPDDPVSPINGMEAMLRPFSLVIPFTVQKGQITGEVQMPSGRTACPYITDNKDG
TVTVKYSPTERGLHEMEIKYDGSHIPGSPLQFYVDAINSGHVTAYGPGLTHGTVNTPATF
TIVTKDTGEGGLSLAVEGPSKAEIACKDNKDGTCTVSYLPTACGDYNIVVKFDDKQIPGS
PFTAKITGDDFTRTSQLNVGTASDVSLKIMETDLKSLMASIRAPSGNEEPCVLKRLPNRH
IGISFTPKEVGEHVVSVKKTGKHVSNSPFRIMVGQSEIGDASKVKVFGQGLIEGHTFEVA
EFIVDTRNAGYGGLGLSIEGPSKVDINCDDVEDGTCKVTYCPTEPGNYIINIKFADQHVP
GSPFTVKVFGEGRVKESITRRRQAPSIASVGSTCDLNLKIPGNWFHMVSAQERLTRTFTH
SSHTYTRTERTEISKTRGGETTREVRVEESTQVGGEPFRDVFTDLLGREGEAGMQEMVAQ
VTSPGGKTEDAEIIKGEDSTFSVRFVPQEMGAHTVNVRYRDQHVPGSPFQFTVGPLGEGG
AHKVRAGGTGLDRGVAGVPGEFSIWTREAGAGGLSIAVEGPSKAEITFEDRKDGSCGVSY
VVQGPGDYEISIKFNDEHIPDSPFTVPISTLSDDARRLTITSLQEMSLKVGHEASFAVQL
NGARGLIDAKTQSPSGATEECSITELDADQHAIRFIPRENGLHTIDVRFNGSHIPGSPFK
IRVGELGQNGDPGLVSAFGSGLERGTTGLASDFMVNTCNAGSGALSVTIDGPSKVKMDFQ
ECPEGYKVSYTPTAPGNYLISIKYGGPQHIVGSPFKAKVTGPHLSSGHGLRETSSVLVET
VSKSTAKGAAFASFPKFSSDASQVLLRGAGLSKAFISQKNSFTVDCSQAGTNMLMVGVHG
PERPCEEVYVKHMGNRMYNVTYTVKEQGSYILIVKWGDDNVPGSPFHVTVP
NT seq
8613 nt
NT seq
+upstream
nt +downstream
nt
ggcgaggaagaggaggaggaggaagagatgccggccacggagaaggacctggccgaggac
gcgccctggaagaagatccagcagaacaccttcacgcgctggtgcaacgagcacctgaag
tgcgtcaacaagcggatcgcggacctgcagaaggacctgagcgacggcctgaggctcatc
gggctgctggaggtcctcagccagaagaagatgttccgaaagttccactgcagacccaac
tttcggcagatgaagctggagaacgtgtcggtggcgctggagttcctggagagagaacac
atcaaactggtgtccatcgagcagctgacaacagctgctaaaaaaaggagaccacaaaga
ggtctgcagagaccacaacaggacctgggtcagatgaaccccgatgatctcatctctggt
tggtcggtcggtccagcagccgggctcatgtggacctgtctggacccgggtctgacctgt
gacggggtcagagactccaaagccatcgtggacgggaacctaaagctgatcctgggtctg
atctggaccctcatcctgcacttctccatctccatgcccatgtggggggacgaggacgat
gaagatgccaagaaactgactcccaaacagcgtctgctcggctggatccagaacaaggtc
cctcagctccccattaccaactttcatcgagactggagggacgggaaggcgctgggagcc
ctggtggacaattgtgcccctggtctgtgtccagactgggaaacatgggaccccagtcag
ccggtggaaaacgccagagaggccatgcagcaggcagatgattggttgggcgttccccag
gtcattgccccagaggagatcgtggatcccaacgtggacgagcactccgtcatgacttac
ctgtcccagtttcctaaagccaaactgaagcctggtgcccccctgagggcaaagacgctg
cacccgagaagggccaaagcctacggcccaggcaagtacagcacccacagtgtggaatct
cgaggtaacgtggttctaaaaccagcagagttcctggtggagacggtggaagccgggctg
ggtgaggttctggtttacgtggaagatccagaaggtcacacggaggaggcccgagtcacc
cccaacaatgacaagaacagaacctactctgtggtctacctgcccaaagtggagggcttt
catcaggtgaaggtgctgtttgcagggcaggacattgacagaagtcctttccgagtgaac
gtgtcaaaggccatgggtgaccccacccgtgtccaggctcgggggccgggtctgcagcag
accgggaacgtggcaggaaaacccacctatttcgatatttatactgcaggcgctggtgct
ggagatgttggcgtgattctcgttgattccaacggacgcagggacacggtggagattgtc
ctagagaacagaggggacagtgttttccgctgcacctacattcctgtcctggaggggtta
cacatggtccatgtgacctttgcaggccaacagattcccagaagccccttcgctgcccac
atctcagaagcgccgcagagcgtccactctccacggtctccggtggagtgtggaccgtcc
atccgcacttcaccccctgacaagataaagagaggccccccgccaactccacccaaaccc
aggagaccaacatgtaatcccaatgcttgtcgggcttcgggccgaggtcttcagccaaag
ggtgtccgggtgaaggaggtggcagattttaaagtttacgccaaaggaagcggcagcgga
gagctgaaggtggtggtgaaaggaccgaggggcgctgtcgagcctgtgaaggttgtagag
atgggcaatgacatgtttgagtgtagttattaccccgtcagcagagggaagtatgtggtc
accatcagctggggaggacacaacatcccacgcagtccatttgaggtccatgtgggtgag
gaggcggggcctcagaaagttagggcctggggacctggcctggagactgggatggttggg
aagagtgctgattttgtggtggaggccatcggcaccgaggtgggaacactcggtatgtca
cggctgggggcggggcttgagcgtttcaccgctgattctcaaaggttgtcttggaggtgt
gaaatgaagcttcctctgactgcaggtttctccatcgagggtccttctcaagcaaagatc
gaatgtgatgataaaggcgatgggtcatgtgatgtccgctactggcccactgaaccaggc
gactacgccgttcacgtcatatgtgatgatgaggacatcaaggacagccccttcatggca
catgtcctttcagcagccaatgacaccttcccagaaaatgtgaaatgttctggtccaggc
ctggaaccactgggctgcatcatcaacaaaccagctgaattcaccatggacacccgtgga
gctggcagaggagagctgaagctgtatgcgcagatgttgggaatgggcttcctctttcag
gatgcggagggattccctatcaacatccagatgacagaaaacgaaaacagaaccttcttc
tgcgtctacgttcccactaaggccatcaaacacactatcatcatcacctgggctggtgtc
actgtccccaacagtccctttagggtgatggttggagagggcagccatccagagaatgtg
aaggtttatggtccaggtgtggagaggttgggcctgaaagccaatgagccaacgtacttc
acggtggactgcagtgaggctggccagggtgacgttagcattgggatcaaatgtgctcca
ggtgtggtgggacctgctgaggccgacatcgattttgacatcatcaagaacgacaatgac
acatttacagtcaagtacacgccccccggctcgggtcagtacaccatcatggtactgttt
gcagatcaggtgagggggtgcacaggtgagctgtttcattctgtcccttcctgtttcctg
tcaacaaacgctttacattttatgttcaaacagcaaattcccatcagccccttcagaatc
aaagtggagccatcacatgatgctgctaaagtgcgagcagaaggtcctgggctgaacaaa
acaggtgtcgaggtcaacaaacccacccacttcactgtttacacgaagggagctgggaaa
gcccagcctgaggtccacttcactgcagcaggaaagggcagcgtggttcaagactttgag
atcattgacaaccacaactactcgtacactgtgcgctacaccgctgtgcagcaggggaac
atgtcaatcgcggtctgccatggaggagaccccatccccaaaagcccatttcacatcatg
gtggcccccctgctggacctcagcaaagtcagcgtccagggtcttaacagcaaggcggac
gtcggcaaggacgaggacttcacagtcagaacacagggcgccggaggtcagggcagactg
gacgtcaaaatcctctcaccatcacggaggccaattccttgcaagctggaatcgggtgtg
aacaatgaggtttacacagtgacgtacatcccccctgaggaaggagcgtacagagtggac
atcagctacgatggaaatcctgtccccggaagtccgtttgccgtagagggggttttgcca
cctgatgctttgaaggttcgggcctatggtccaggacttcagggtggtctagtgggaaaa
ccagccccctttgccattgacacaaagggagctggtactggtgggctaggtctgacagtt
gagggaccctgtgaggccaagatcgaatgtcaggacaatggcgatggatcctgctcggtg
tcctacttacctaccgagcccggtgagtacgccatcaacatcctgtttgcagagcagcac
gttcccgggtcccctttcaaggccgtcgtccagtcgctgtttgatcccagcatggtgact
gttagcgggccaggcctggagcgaggaaaggttaatgaggatggatctttcacggtggac
tgttctaaagccggggatgcagagctcactattgagatcgtctcagagtcaggagccaaa
gctgaagttcatgtccagaacaacagagacggaacctactccatcacctacattccactg
ttccaaggactttacaccatcactatcaaatatggaggctgcgctgtgcccaactttccc
agtcgactactggtggacccagctgtcgatactaccggggtgaaggtctatggaccagga
gtggaacccagaggggtcctgagggaggtgaccactcatttcatcgtggatgcacaatgc
ttctacatgggcggcggtgaccacatcaaagcctgcgtctccaacccttcaggtgctacc
acagacgcctacatcacggacaaaggtgacgggacgtacagagtggagtatacgccccac
gaggacggtttgcacctgattgaagtcctgtttgatgaagttttgctgccaaagagccca
ttcagagtgttggtaacggagggctgtgatcccagtcgagtccgagcctacggtccaggc
ctggaggagggtctggtcaacgcgacaaactgcttcactgttgagaccaggggtgctgga
actggtggactgggcctcgccattgagggtccatctgaagcaaagatgtcctgtaaggac
aacaaagatggcagctgcactgtggagtacatccccttcaattccggagagtacgatgtc
aacatcacctttggtggtcttcctattccagggagcccgttcagtgttcccgtgcgggag
ctagtggatcccagtaaagtcaggtgttttggacctggcctggaaattggtgttcgagca
catgtacctcagaccttcacggtggacagcagtaaggcagggctggcccctctggtggtc
cagctgtacggccccacaggtgttgctgagccgatcactgtcacggacaacaatgatgga
actcacacagcgaactacagtcctgctaatgatggaccgtacacagtttgtgtcaagtat
gcagaccaggaagtcccctgtagccccttcaagattaaaactttacccgcccatgatgcc
agtaaagttcgggccagtggtccaggactaaacgcctcaggaatcacagccagtctgccg
gtggagtttaccattgatgctagagacgctggcgagggactgctcacggtccagattttg
gatccagagggaaagccaaaaagggccaacattcgggacaactggaacggaacgtacaca
gtgtcgtatgtgccagacatgacgggccgttacaccatcaccatcaaatatgggggagac
gagattccatactccccctattgcattcatgccatccctactggagatgccagcaagtgt
ctggtcacagtgtccattggaggacacggaccaggatctggcattggccccaccatccag
attggggaggagacagtcattaccgtagatgcaaaggctgctgggaaaggaaaagtgacc
tgtaaagtcacaactcctgatggggcagagctggatgtggatgtggttgagaacgccgat
ggaacattcgacgtttattacactgctccagaacccggaaaatacgtcatcacaattcgg
tttggaggcgaaaacatccccaacagtccatttcatgtggtggtagaaaaaggtatacgc
ttcttcttgaagttcttgatgttggatgtactgttgaatggtgagcgagtggagatgctg
gccaaagaggtgatgtggtctccggatgaccctgtcagccctattaatggtatggaagcc
atgctacgaccctttagtctggtcattcccttcactgtgcagaaaggacagattacaggt
gaagtccagatgccgtctggtcgaaccgcttgtccttacattacagacaataaagatggc
actgtgacagtgaaatactcgccgacagagcgtggtctgcatgagatggagatcaaatat
gacgggagccacattccaggaagtccactccagttctacgttgatgctattaacagtggt
catgtgacagcgtacggtcccggtctgactcatgggactgtgaacacaccggccacgttc
actattgttactaaagacactggagaaggtggtctgtctcttgctgttgagggtccatct
aaagctgagattgcctgtaaggacaacaaagacgggacatgcacggtgtcctatcttccc
accgcctgtggtgattacaacatcgtggtcaaattcgatgacaaacaaatccccgggagt
ccgttcaccgcaaagatcaccggcgatgacttcacaaggacgtctcagcttaatgttggt
acagcgtcagacgtttccttaaaaatcatggagacggatctgaaaagcctgatggcgagt
atcagagcaccatctggaaacgaggagccgtgtgtgctgaagaggcttcctaacaggcac
attggaatctcgtttacaccgaaagaagtgggcgaacacgtggtgagtgtgaagaagact
ggcaaacatgtgtccaacagccctttcaggatcatggttggacagtcggagattggagat
gccagcaaagtgaaggttttcggtcaggggctcatagaaggacacacctttgaagtggca
gagttcatcgttgacaccaggaatgcaggttacggaggtctcggtttgtccattgaggga
cccagtaaagtggacataaactgtgacgatgtggaagacggcacatgtaaagtcacctac
tgtcccaccgaaccaggaaattacatcatcaacataaagtttgctgatcagcacgtccca
ggaagtccattcacggtcaaagtgtttggtgaaggtcgggtaaaggagagtatcaccaga
aggcgtcaggctccctccatcgccagtgtgggcagcacttgtgaccttaacctaaagata
ccaggaaactggttccacatggtttcagctcaggaacgtctgacccggaccttcacgcac
agcagccacacctacacaagaactgaacgtactgagatcagcaagacccgtggtggagag
accacgagggaggtgagggtggaggagagcacgcaggtgggaggagaacctttcagagat
gtcttcactgacctcctgggacgagaaggtgaggcagggatgcaggagatggtggctcaa
gtgacaagtcccggagggaagacggaagacgcagagatcataaaaggagaggacagcacc
ttcagcgttcgctttgtacctcaggaaatgggtgctcacaccgtgaatgttaggtatcga
gaccagcacgtccctgggagccctttccagttcactgtggggcctctcggggaaggagga
gcccataaggtccgagctggaggtactggcctggaccgaggagtggccggagtcccaggt
gagttcagtatctggaccagagaggctggcgctggaggtctgtcgatagctgttgaaggg
ccgagcaaggctgagatcacctttgaagatcggaaggatggatcctgtggtgtctcctat
gtggttcaagggcctggtgactatgagatttccatcaaatttaacgacgagcacatccca
gactctccgttcaccgtcccgatatccacgctgtcggacgatgcgcgacgcctgaccatc
accagcctgcaggagatgagtctaaaagttggacacgaggcctcctttgctgtccagctg
aatggagccagaggcctgattgatgctaagacccagagcccatcaggggccacagaggag
tgttccatcactgagctggacgctgaccaacatgccatcagattcatcccacgagaaaac
ggacttcatactatagatgttcgtttcaacggcagccacatccccggaagtcctttcaag
atccgagttggggaactagggcagaatggagacccgggcttggtgtctgcctttggatcg
ggattggagagagggaccactggcctggcatcagacttcatggtgaacacatgtaatgct
ggttcaggagctctgtctgtgaccattgatgggccttccaaagtgaagatggactttcag
gagtgtcctgaaggttacaaggtgtcctacacacccacagctcctggaaactacctcatc
tctatcaagtatggaggaccgcagcacattgtaggcagccccttcaaggccaaggtcacc
ggacctcacctttccagtggacacggcctacgcgaaacctcctccgtacttgtggaaact
gttagcaagtctacagcaaagggtgctgcctttgcctcctttcccaagttctcctcagat
gccagtcaagtccttctgagaggtgcaggcctgtccaaagcttttattagtcaaaaaaac
tcatttacagtcgactgcagccaagcaggcaccaacatgctgatggtcggtgttcacgga
ccagaaagaccctgtgaggaggtgtatgtcaaacacatgggcaacaggatgtacaacgtc
acctacacggtgaaggagcaaggcagctacatcctaatcgtcaagtggggagacgataat
gttcccggcagtccgttccatgttaccgtcccg
DBGET
integrated database retrieval system
