Tetraodon nigroviridis (spotted green pufferfish): GSTEN00011896G001
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Entry
GSTEN00011896G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GSTEN00011896G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00011896G001
Membrane trafficking [BR:
tng04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
GSTEN00011896G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-ProteinID:
CAF95296
UniProt:
Q4SVN6
LinkDB
All DBs
Position
undetermined
AA seq
833 aa
AA seq
DB search
MIGSPDVVAFTKEDEYLVTDPDPWALPKEFNVPLHPLNDLNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPNDPKVCGTFDLNFFSLRIMSVDYQASFVGHPPGTGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASEC
LKAGNRRAFAKELQRKLRDLEYTQSVLQREEGLQREAGPQCVYSAHTVEKANELANVERS
IFEHRDLLRQISSYHHRPRRDPHAVTCQKCIADGLNECEDLLNHEEVCEEEDEAIKRRPS
YTPQLIKAKSAKCFDKRLKTLQELCDDTFYKATVDLLQETEKIFRGDLSYLHTRRLEREL
HRKQKVTSFLFEENVDSDEGDGESLRPFCAVNHAVQNDDLSNPPSTVMRKELDGKEPSDL
LGLLESHLESSASDQTPETQESSDETKGSFSTQKSGTDQAGPQEDSACEGPDSDPTPDLN
TDPDRETSSEEIDTTNGEDEGDQTPVSLLEVASELGDAEALADDAADIPPDVLVPIDATC
CMTQKSFLYEDSAPEAVLRRHHRSPRQRSADGVVKQEPQPCFLWPMATWWVLLPPKHHHQ
RAGASGTDQAASPLGCGGVMAASHRKKAGQGALRFVRQYPFAMQAIWCLLSGRSLVVLGA
DEGRVRRLVAALALYLPAPGRVASPLGSSVLYSLSRYSRYISILDADQKTLRCPPYCGQL
LANIADHRTFIRRGSTYFLHLQSTLCRLAAKAFLYTFTHHLHLLVSSTEGPEAVEARRHC
FMQDQLGLGEEDRRILLHLSQLITQRYLQPVTGTTTASAPFSFDYTTSIFYKI
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgataggatcacctgatgtggtggcattcaccaaagaggacgaatatttagtgacagac
ccagacccctgggctctccccaaggagttcaatgttcccctccatccactgaatgacctc
aatccctgggccaaaacctcatatgccaagttcaccaaagacttcatcctcatctcggag
ttctcagagcaggtgggccctcagcctctcctcacgattcccaatgaccctaaagtctgt
ggcaccttcgacctcaattttttctccctgcgcatcatgtcagtggactaccaggcttcg
tttgtgggccatccacctggcactggctacccaaggctcagctttgtggaggactccagg
gtggtgctgggtgactcgaaggagggggcctttgcctacgttcatcatctaacactttac
gacctggaagcgaggggctttgtgcgacccttctgcatggcctatgtttcagcagatgag
aggaagatcatgctgcagtttcaggagctgtcgctccgcttctcacaggcctctgagtgt
ctgaaggctggaaacaggagagcgtttgccaaagaactccagaggaagctccgggacctt
gaatacacacagtcggtgctgcagagggaggagggcctgcagagagaggccgggccccag
tgtgtctattccgcccacactgtggaaaaggccaacgagcttgcaaacgtggagaggagc
atctttgaacacagggacctgttgaggcagatcagctcctaccatcaccgtccccgccgt
gaccctcacgctgtcacctgccaaaagtgcatcgcagacggcctgaacgaatgcgaggac
ctgttaaaccatgaagaagtatgcgaggaggaagatgaagccatcaaacgcaggccgtcc
tacacgccacagttgatcaaagccaaatccgcaaagtgtttcgacaagcgtctgaagacg
cttcaagagttgtgcgatgatactttctacaaggccaccgtggacctcctgcaggagacg
gagaagattttccgaggagatctgagctatctgcacacacgtcggctggagcgggagctg
cacaggaagcagaaggtgaccagttttctgtttgaggagaatgtggattcagatgagggc
gacggagaaagcctgaggcccttctgtgctgtgaaccatgctgtacaaaacgatgacctc
tcaaatcctccatctactgtgatgcgtaaagagcttgacggtaaggagccttcggatctt
ctggggctgctggagagccatctagagtcctctgcttcagaccagactccagaaacccaa
gagagctcagacgaaacaaaagggagcttcagcactcaaaagagcggcacagaccaggca
ggaccacaagaggattcagcctgcgaaggtcctgattctgaccccaccccagatcttaac
actgacccggacagggagaccagcagcgaagagatcgacaccaccaatggggaggatgag
ggtgaccagacgccggtgtctttgctggaagtagcctctgagctgggggacgccgaagct
ctagctgatgatgctgctgacatcccgcctgatgtgttggttccaatagacgcaacatgt
tgcatgacccaaaaaagtttcctttacgaggattcggcaccagaggcggtgctgcgccgt
caccaccgctccccccggcaacgctccgctgatggtgtcgtcaagcaggaaccgcagccc
tgctttctctggccgatggctacgtggtgggttctcctgcctccgaagcatcaccaccaa
cgggctggagcttccgggacagatcaggctgcctcacctctgggctgtggaggggtcatg
gcggcgtcacacagaaagaaggccggccagggagctttaaggtttgtgcggcagtatccg
tttgccatgcaggccatttggtgtctgctgagcggccggagcctggtggtgctcggggca
gatgaaggtcgagtccgccggctggtcgctgctctggccctctacctgcctgcacctggg
agagtggcgtctccgctgggttcgagcgtgctttactcgctgtcccgctacagccgctac
atctccatcctggacgccgatcagaagacccttcgctgtccgccctactgtggacagctg
ctggccaacatcgcagaccaccgcaccttcatccgccgcggttccacctatttcctccac
ctgcagagcacgctctgccgcctggccgccaaagccttcctctacaccttcacccaccac
ctccatttactggtcagctccaccgagggccccgaggcggtggaggcccgacgccactgc
ttcatgcaggaccagctgggcctgggggaggaggacaggcgcatcctgctgcacctcagc
cagctcatcactcagcgctacctgcagcctgttaccgggaccacaacggcatcggctccc
tttagttttgactacaccaccagcattttttacaaaatctaa
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