Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015596G001
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Entry
GSTEN00015596G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04270
Vascular smooth muscle contraction
tng04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
GSTEN00015596G001
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
GSTEN00015596G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00015596G001
Membrane trafficking [BR:
tng04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
GSTEN00015596G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
RGS-like
Motif
Other DBs
NCBI-ProteinID:
CAF98043
UniProt:
Q4SMT9
LinkDB
All DBs
Position
8
AA seq
678 aa
AA seq
DB search
MLFKSKTPTIVSDEEKCQSIFSAVASYMKHLGVKTRAADSKKSRGGFFRRQLVKNKKEES
TKAKPRVFPGIPSWIAGNTDKEKATAERKGPTPGRASLIEPAPPIVPKKPVCSAAPASLP
ALEVSEGSGNNISAATSPESSHPDGLSTNRLEPPSVSDGGDVSPVGLGGGLTTLEPVSPS
DTPTEENLERDSRKVTRSESARVDRHSSRRHGSSRAKQFRSRSDVDLQPPATTPTTAPFN
PQLLHPFEGPVLVPEGQSHSPTSPSPQLEEMEPRFLEFEQDPPNWRELASPEALSGLSKK
ETKRQEVINELFATEHAHVRMLSVLQMIFSKPLEREQLLTTIELSTIFPNLDEIIEMHCE
CHEYGATMFIISAAIFFKCPPIKTQSGVTWLRKMVHLFVNSDNFYENLKKQRLEDNFIVK
SISTTLLNRFEGTEGEWFQKLTARFCSHQSWALDQIKNRQKKDPRFNSFILEAESKPQCR
RLQLKDIIPIEMQRLTKYPLLLENIAKNTEDPAEKERIQQSAECCRKILNHVNEEVKVME
NLLSLKEYQRKLDTSGLKPSIELYTEYKNLDLTQRKMLYEGPVTWKVTKEKAIEVQCVLL
GDLLVLLQKQDDKMVLKCQSKSNIAVQEGKQMLSPIIKLNSVFLREVATDRKAFYVIFTW
DSGAQIYELVAQSVGERK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgctatttaaaagcaaaacacctacgattgtctcagatgaggaaaaatgtcagtccatc
ttctcagctgtggcctcctacatgaagcacctcggggtaaagaccagggcagctgacagt
aaaaagtcaagaggtggtttcttcaggaggcagctggtgaagaacaagaaagaagaatca
accaaagccaagcccagggtgtttcctggtattcccagctggattgcaggcaacactgac
aaagagaaagccaccgctgaaaggaaaggtccgacacccggcagagcctctctgattgaa
cccgcaccccctatcgtcccaaagaagcccgtgtgtagtgctgctcccgcatccctgcct
gcgttagaggtcagcgaaggctcaggcaacaacatcagcgccgccaccagcccagagtct
tcccaccctgatggcctttcgaccaaccgtttagagcctccgagtgtgtcagacgggggc
gacgtgtctcccgttggacttggtggagggctgacaactctggagcccgtttcacccagt
gatacacccacagaagaaaatctggagcgagacagtaggaaagtgacacgtagtgagagt
gcccgtgtggaccggcactcctctcggcgccatggctcttcccgggccaaacagtttcgc
tcccgtagtgacgtggacctccaaccaccggctacaacgccaacaaccgccccgttcaac
ccccagcttctccatccttttgaagggccagttttagttcccgaaggccaaagtcactcc
ccgacgagcccttccccacaactggaggagatggagcctcgcttcctggagtttgagcag
gaccctcccaactggagggagctggcctcccctgaagccctgtctggcctcagcaagaaa
gagaccaaaaggcaggaagtcatcaacgagctgtttgctaccgagcacgctcacgtgcgg
atgctgagcgtccttcagatgattttttccaagccgttggagagagagcagctgctgacc
accatcgagctgtccactattttccccaacttggatgaaatcattgaaatgcactgtgag
tgtcacgagtacggagccaccatgtttattatatccgctgcaattttctttaaatgtccc
ccaataaaaacacagagcggtgtgacatggcttagaaaaatggttcatttgtttgtgaac
tcagataacttttatgaaaacctgaagaaacagcgcttggaagataacttcattgtcaag
tcgatcagcacaaccctgcttaacagatttgagggtacagagggggagtggttccagaaa
ctgactgcccggttctgcagtcaccagtcgtgggccttggaccagattaaaaacaggcaa
aaaaaggacccgcgctttaactccttcatactggaggcagagagtaagccccagtgtcgc
aggctacagctcaaagacatcattccaatagaaatgcagaggctgaccaagtacccactg
ctgttggagaacattgccaaaaacacagaggacccagcagagaaggagagaatccagcag
agtgcagagtgctgccgaaagatcctcaaccatgtcaacgaagaggtcaaagtgatggag
aacctgttgtctctgaaggaataccagcgcaaattggacacatcgggattgaaacccagc
attgagctttacactgagtataagaatcttgacctgactcagagaaagatgctttacgag
ggccctgtgacctggaaagtgacgaaggagaaagcaatcgaggtgcagtgtgttttactc
ggagatttgctggtgcttctgcaaaagcaggatgacaaaatggtgctgaagtgccagagc
aagagcaacattgctgtgcaggagggcaagcagatgctgagcccaattatcaagctgaac
tcagtctttctgcgtgaggtggctacagatcgaaaggccttctatgtgatcttcacctgg
gatagcggcgctcagatctatgaacttgtggctcagtctgtcggggagagaaaa
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