Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018975G001
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Entry
GSTEN00018975G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00018975G001
Ion channels [BR:
tng04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
GSTEN00018975G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_3
Ank_5
RRT14
DUF6744
Motif
Other DBs
NCBI-ProteinID:
CAG00509
UniProt:
Q4SFS3
LinkDB
All DBs
Position
7
AA seq
796 aa
AA seq
DB search
RRQALRGPAYMFSAPSYSLSEVEQRFLEAAEYGNIPEVRRMLLHVPNLNINAVDYMGQNA
LQLAVANEHLEVTELLLGRADLARVGDALLLAISKGYIRITEALLSHPAFRDARRLTASP
AQADMLDDFYAYDEDGTRFSHDVTPLILAAHCQEYEIVHTLLSKGARIDHPHDYFCGCDS
CNYQQQYDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELAVLADIEKEFKNE
YCCLSSQCKDYVVGLLDLCRSTEEVEAILSGETDTDDAYSPPGRPSLTRLKLAIKYELKK
FVAHPNCQQQLLSIWYENLPGLRQQTTAVKLLVVMAVAIGLPGLALAYWITPCSRVGKIM
RSPFMKFVAQASSFTIFLGLLILNAADRFAGTTLLANMTHQHYHQHTGGPRPDPLLLYRM
TTTPFTWMEILIISWIIGMIWAEVKEIWSQGPGEYVLEPWNFLDFGMLAIFLASFSCRFS
ILRHVEAAQTFVYTQHYPTLINVTLPPEIHYFTLARIHWLPSDPQLVSEGLYAVAVVLSF
SRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFLAFMIGMFNLYSYYLGAKQNDA
FTTLEESFKTLFWAIFGLSEVRSVVVNNGHKFIENTGYVLYGVYNVTMVIVLLNMLIAMI
NSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLIPSPKSVLGLATCVRTLILRL
VRRHSEEKTGTQLNQKIMKRLIKRYIIKAQADRESDEITEGELKEIKQDISSLRYELLEE
KAQNMETLDALLRRMG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
cgacggcaggccctccgcggccctgcctacatgttctctgctccttcgtacagcctgtca
gaggtggagcagcgcttcctggaggcggccgagtacggcaacataccggaggtgcggcgc
atgctgctgcacgtgcccaacctgaacatcaacgctgtggattacatgggccagaacgcg
ctccagctggctgtggccaacgagcacctggaggtgacagagctgctgctggggcgggcg
gacctggccagagtgggcgacgctctgctcttggcaatcagtaaaggttatattcgtatc
acggaagccttgttgtctcatccagccttcagagatgcccgtcgtctcacggcgagtcca
gctcaagcagacatgctggatgacttttacgcctacgatgaggacgggacgaggttctcc
catgacgtcactcccctgatcctcgctgcgcactgccaggaatacgagattgttcacacg
ctgctgagtaaaggggctcgcatcgaccatccacacgattacttctgtggctgcgactcc
tgcaactatcagcagcagtacgactccttcagccactcgcgatcgaggataaacgcctac
cgaggactggccagtcctgcctacctgtccctgtccaacgaggacccggtgttggccgcc
ttggagctcagcaatgaactggctgtgctggctgacattgagaaggagtttaagaatgag
tactgctgtctgtcgagccagtgtaaagactacgtggtgggtcttctggacctgtgtcgc
agcaccgaggaggtggaggccatcctgagcggagaaaccgacactgacgatgcctatagt
ccgccggggcgaccctcgctcacacgtcttaaactagccatcaagtacgaactcaaaaag
tttgtggctcatcccaactgccagcagcagctgctgagtatctggtatgaaaacctgccg
ggtctgaggcaacaaaccacggcggtgaagctgctggtggtgatggcggtggccataggg
ctgccgggcctggccctggcctactggatcactccatgtagcagagtgggaaagatcatg
cggagccccttcatgaagtttgtagcccaagcctcgtccttcacaatcttcctgggactt
ttgatcctcaatgctgccgatcgctttgctgggacgaccctgttggccaacatgacgcac
caacactaccatcagcacacagggggaccccgaccggacccactgctgctctaccgcatg
accacaacgcccttcacctggatggagatcctgatcatttcatggatcataggtatgatc
tgggctgaggtgaaggagatatggagtcagggaccaggggagtacgtccttgagccttgg
aacttcctggattttggcatgctggccatcttcctcgcctccttcagctgccgcttctcc
attcttagacacgtggaggccgcccagacctttgtatacactcaacactatccaacactg
atcaatgtgactcttcctccagagattcactacttcacactagcccggatccactggctg
ccgtcagatccccagctggtctcggagggtctgtacgctgtcgctgtggtgctgagcttc
tctcggatcgcctacattctcccggccaacgagagctttggacccctgcagatctcctta
ggcaggaccgtaaaggacatcttcaagtttatggtcatcttcatcatggtctttctggca
ttcatgatcggcatgttcaacctgtactcgtactacctgggcgcgaagcagaacgacgca
ttcaccaccctggaggagagcttcaagacgctgttctgggctatatttggtctctccgag
gtcaggtctgtcgtcgtcaacaacggacacaaattcatcgagaacactggctacgtgctg
tacggggtatacaacgttaccatggtgatagtgctccttaacatgctcatcgccatgatt
aacagctccttccaggagattgaggatgatgctgatgttgagtggaagtttgctcgagcc
aagctttggttctcctactttgaggaggggaggactcttcccgtgcccttcaacctcatt
cccagtcctaaatccgtgctggggctggccacttgtgtcaggaccctgattctgcggtta
gtgcggcgacacagtgaagagaaaactggcactcaactcaaccagaaaatcatgaaacgc
ctgataaagcggtacatcatcaaagctcaggcggaccgagaaagtgatgagatcactgaa
ggtgagctgaaagagatcaaacaagacatctccagcctgagatacgagctgctggaggag
aaggcgcagaacatggagacgctggacgcgctgctgaggaggatggga
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integrated database retrieval system
