Tetraodon nigroviridis (spotted green pufferfish): GSTEN00032374G001
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Entry
GSTEN00032374G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16857
thrombospondin 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04115
p53 signaling pathway
tng04145
Phagosome
tng04148
Efferocytosis
tng04350
TGF-beta signaling pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04518
Integrin signaling
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
GSTEN00032374G001
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00032374G001
04518 Integrin signaling
GSTEN00032374G001
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
GSTEN00032374G001
04148 Efferocytosis
GSTEN00032374G001
09143 Cell growth and death
04115 p53 signaling pathway
GSTEN00032374G001
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00032374G001
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00032374G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00032374G001
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tng00536
]
GSTEN00032374G001
Membrane trafficking [BR:
tng04131
]
Endocytosis
Phagocytosis
Opsonins
GSTEN00032374G001
Glycosaminoglycan binding proteins [BR:
tng00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
GSTEN00032374G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
EGF_3
TSP1_CFP_C
cEGF
TSP1_ADAMTS
Laminin_G_3
Laminin_G_2
Laminin_G_1
EGF
TSP1_CCN
Motif
Other DBs
NCBI-ProteinID:
CAG10667
UniProt:
Q4RLR5
LinkDB
All DBs
Position
10
AA seq
1171 aa
AA seq
DB search
MMLCGIFLLLMLWGCEGARLAGSPDDNSVYDLFDLARVSKRQNGVTLVKGADPYSPAYKV
LNADLIPSVPDSSFRDILDSILAERGFLLIINLKQFRKSRGSILTIEKNDGSGSIFEIVS
NGRANTLEVLYSTANHQQVVTIEDTDLATGHWKNITLFVQDDRVKLYVGCEEVNEAEMDF
PIHKVLTQELADVATLRIAKGAVRDKFTGVLQNVRFVFGTSLDEILRNKGCQNGAVLTDV
MTLENPVNGSSPAVQTDHPGHKAKDVQPGQVCGLSCEDIAGIFKELRGLGVVVRKLSIDL
RKVSEESMLLKNETKQSGICIHNGIVYQDKNEWTVDSCTECTCQNSATVCRKISCPLVPC
ANATVPDGECCPRCGSSMVSAQGGWSPWSAWTQCSVTCGRGVQQRGRSCDRINSNCEGTS
VQTRDCYPQECDKRFKQDGAWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGMDCQGE
GRQTEICRKSPCPIDGGWGPWSPWDTCTLTCGKGIQTRKRLCSDPAPRFGGKDCVGEAKM
SQVCNKQDCPIDGCLSNPCFPGAMCTSFPDGSFRCGKCPLGYTGDGLTCKDIDECKEVPD
ACYVHNGVHLCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCEPRNPCRDGSHDC
HKNANCIYLGVYSESMFRCECKPGYAGNGHICGEDSDLDGWPNHNLVCVENATYHCSKDN
CPSLPNSGQEDHDKDGLGDECDTDDDNDRIPDDRDNCPRLYNPAQYDADRDDVGDLCDNC
VFEANTDQTDTDSNGEGDACAVDIDGDGILNEDDNCPYVYNVDQRDTDRDGVGDHCDNCP
LEHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHD
DDNDGIPDDKDNCRLAFNPDQTDSDGDGRGDICKDDFDQDSVLDIYDVCPENFAISETDF
RRFQMVPLDPTGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTD
RDDDYAGFVFGYQSSSRFYTVMWKQITQTYWSTTPTRAQGYSGLSIKVVNSTTGPGEHLR
NALWHTGDTAGQVRTLWHDPKKIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGN
IYDKTYAGGRLGLYVFSQEMVYFSDLKYECR
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatctttttgctgctgatgctttggggctgcgaaggtgccaggctg
gctggcagcccagatgataacagtgtctatgacctttttgatctggcccgggtgagcaag
cgtcagaatggagtaactctggtcaaaggtgccgatccctacagccctgcctacaaggtt
ctgaatgcagacctgatcccctcagtccccgacagctccttcagggacatccttgactcc
atcctggctgagaggggcttcctgctcatcatcaacctgaagcagttcaggaaaagccga
ggcagcattttgaccattgagaagaatgacggctctggatccatttttgagattgtttcc
aacgggagggcaaacaccctggaagtgctctactccaccgccaaccaccagcaggtggtg
actatcgaggacacagatttggccacgggacactggaaaaacatcacgctgttcgttcaa
gacgatcgagtgaagctttacgtgggttgtgaggaagtcaacgaggcagagatggacttt
cccatccacaaagtgctcacccaggagctggcggacgtcgctaccctcaggatcgccaag
ggagcagtgagggacaaattcacgggagtgcttcagaacgtgcgctttgtttttgggacc
tcacttgatgagatattaagaaacaaaggatgccagaacggagctgtgttaaccgatgtc
atgaccctggagaaccccgtcaacggctccagccccgccgtccagaccgatcatcctggc
cacaaagccaaagatgtccagcctggacaggtctgtggtttgtcctgtgaagacatcgca
ggcatatttaaggagctcaggggacttggtgtggttgtgagaaaactgtccattgaccta
cgcaaagtgtctgaggaaagcatgctgctgaaaaatgagacgaaacaaagtggaatctgc
atccacaacggcattgtgtaccaggacaagaatgaatggacggtggacagctgcaccgag
tgcacctgccagaactctgctacggtgtgtcgcaaaatctcctgccccctggtcccatgc
gctaacgctaccgtgcctgatggagagtgctgcccacgctgcgggagttccatggtctca
gcacagggtggctggtccccctggtctgcgtggacccagtgttccgtgacctgtggtcgg
ggcgtccagcagcgtggacgctcctgcgaccgcatcaacagcaattgcgagggcacctcg
gtccagacccgtgactgctacccccaggaatgcgacaaacgattcaaacaggacggcgcc
tggagccactggtccccctggtcatcatgctctgtgacctgtggtgagggggttatcacc
cggatacgcctctgcaactcccccacaccccagatgggtggcatggactgccagggtgaa
ggacgtcaaactgaaatctgccgcaagtcaccttgtcccatcgatggagggtggggaccg
tggtcaccatgggacacctgcactctcacttgcggcaaaggaattcagacccgcaagcgt
ctgtgctcggaccctgcccccagatttggaggaaaggattgtgttggtgaggctaagatg
tctcaggtgtgcaacaaacaagactgtcctattgatggctgtctgtccaacccttgcttc
cctggtgcaatgtgcaccagtttcccagacggctccttccgttgtggcaagtgtccactt
ggctacaccggagacggcctcacttgcaaggacatcgatgagtgcaaagaggttcccgat
gcctgctacgttcataatggagtccatctgtgtgagaacacagaaccaggttacaactgt
ctgccctgccctgcacgcttctctggccctcagccctttgggaggggagtagagcaggca
actgccaaaaaacaggtttgtgagccccgcaatccctgtcgggatggcagccacgactgc
cacaaaaatgcaaactgcatttacctcggcgtctacagcgagtccatgttccgctgtgag
tgcaaacctgggtacgctggaaatggtcacatctgtggagaggacagcgacctggacgga
tggcccaaccacaacttggtgtgtgtggagaacgccacctaccactgcagcaaggacaac
tgccccagtcttcctaattccggccaggaggatcatgacaaagatggcctgggtgatgaa
tgcgacacggatgatgacaatgacaggattccagatgatagggacaactgtccaagactg
tacaaccctgcgcagtatgacgcagacagagatgatgttggtgatctctgtgacaactgt
gttttcgaggctaacactgaccaaactgacaccgacagtaatggagagggtgacgcctgt
gctgttgacattgacggtgatggtatcctgaacgaggacgacaactgcccgtatgtttat
aacgtggatcagagagacactgacagggacggcgtgggtgaccactgtgacaactgccct
ctggaacacaaccctgatcagattgattcagactcagatcgtgtgggagacaagtgtgac
aacaaccaagacattgatgaggacggtcaccagaacaacttggacaactgcccctatata
cccaacgccaaccaggctgaccatgacaaggatggaaagggtgatgcctgtgaccatgac
gacgacaacgatggcattcctgatgacaaagacaactgtcggctggcttttaaccctgat
cagacagattctgatggcgatggccgtggtgatatctgcaaagatgactttgatcaagac
agtgttttggacatttatgacgtgtgccctgagaattttgccatcagtgaaacagatttc
cgcagattccaaatggtgcctttagacccaacaggcacctcacagatcgaccccaactgg
gtggtgcgacatcagggcaaggagttggtccagactgtcaactgtgatcctggcatcgct
gttggttatgatgagttcagcgcagtggatttcagcgggaccttctttatcaacacggac
agagacgatgactacgctggctttgtgttcggttaccagtcaagctcacgcttctacacg
gtgatgtggaaacagatcacacagacgtactggtctaccacacccacgagagctcaaggt
tactctggcctgtcaatcaaagttgtcaattccaccactggtcccggtgagcacttgagg
aatgccctgtggcacacgggagacaccgcaggacaggtgcgtactctgtggcatgacccc
aagaaaattggctggaaggacttcacagcctacagatggcatctgacccacagacccaaa
actggacttattagagtggtcatgtacgaaggcaaaagaataatggctgattctggaaac
atctacgacaagacatacgctggtgggcgactaggcctgtacgtgttctctcaggagatg
gtttacttctctgatctgaagtatgaatgcaga
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integrated database retrieval system
