Tetraodon nigroviridis (spotted green pufferfish): GSTEN00032374G001
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Entry
GSTEN00032374G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16857
thrombospondin 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04115
p53 signaling pathway
tng04145
Phagosome
tng04148
Efferocytosis
tng04350
TGF-beta signaling pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
GSTEN00032374G001
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00032374G001
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
GSTEN00032374G001
04148 Efferocytosis
GSTEN00032374G001
09143 Cell growth and death
04115 p53 signaling pathway
GSTEN00032374G001
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00032374G001
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00032374G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00032374G001
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tng00536
]
GSTEN00032374G001
Membrane trafficking [BR:
tng04131
]
Endocytosis
Phagocytosis
Opsonins
GSTEN00032374G001
Glycosaminoglycan binding proteins [BR:
tng00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
GSTEN00032374G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
EGF_3
TSP1_CFP_C
cEGF
TSP1_ADAMTS
Laminin_G_3
Laminin_G_2
Laminin_G_1
EGF
TSP1_CCN
Motif
Other DBs
NCBI-ProteinID:
CAG10667
UniProt:
Q4RLR5
LinkDB
All DBs
Position
10
AA seq
1171 aa
AA seq
DB search
MMLCGIFLLLMLWGCEGARLAGSPDDNSVYDLFDLARVSKRQNGVTLVKGADPYSPAYKV
LNADLIPSVPDSSFRDILDSILAERGFLLIINLKQFRKSRGSILTIEKNDGSGSIFEIVS
NGRANTLEVLYSTANHQQVVTIEDTDLATGHWKNITLFVQDDRVKLYVGCEEVNEAEMDF
PIHKVLTQELADVATLRIAKGAVRDKFTGVLQNVRFVFGTSLDEILRNKGCQNGAVLTDV
MTLENPVNGSSPAVQTDHPGHKAKDVQPGQVCGLSCEDIAGIFKELRGLGVVVRKLSIDL
RKVSEESMLLKNETKQSGICIHNGIVYQDKNEWTVDSCTECTCQNSATVCRKISCPLVPC
ANATVPDGECCPRCGSSMVSAQGGWSPWSAWTQCSVTCGRGVQQRGRSCDRINSNCEGTS
VQTRDCYPQECDKRFKQDGAWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGMDCQGE
GRQTEICRKSPCPIDGGWGPWSPWDTCTLTCGKGIQTRKRLCSDPAPRFGGKDCVGEAKM
SQVCNKQDCPIDGCLSNPCFPGAMCTSFPDGSFRCGKCPLGYTGDGLTCKDIDECKEVPD
ACYVHNGVHLCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCEPRNPCRDGSHDC
HKNANCIYLGVYSESMFRCECKPGYAGNGHICGEDSDLDGWPNHNLVCVENATYHCSKDN
CPSLPNSGQEDHDKDGLGDECDTDDDNDRIPDDRDNCPRLYNPAQYDADRDDVGDLCDNC
VFEANTDQTDTDSNGEGDACAVDIDGDGILNEDDNCPYVYNVDQRDTDRDGVGDHCDNCP
LEHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHD
DDNDGIPDDKDNCRLAFNPDQTDSDGDGRGDICKDDFDQDSVLDIYDVCPENFAISETDF
RRFQMVPLDPTGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTD
RDDDYAGFVFGYQSSSRFYTVMWKQITQTYWSTTPTRAQGYSGLSIKVVNSTTGPGEHLR
NALWHTGDTAGQVRTLWHDPKKIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGN
IYDKTYAGGRLGLYVFSQEMVYFSDLKYECR
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatctttttgctgctgatgctttggggctgcgaaggtgccaggctg
gctggcagcccagatgataacagtgtctatgacctttttgatctggcccgggtgagcaag
cgtcagaatggagtaactctggtcaaaggtgccgatccctacagccctgcctacaaggtt
ctgaatgcagacctgatcccctcagtccccgacagctccttcagggacatccttgactcc
atcctggctgagaggggcttcctgctcatcatcaacctgaagcagttcaggaaaagccga
ggcagcattttgaccattgagaagaatgacggctctggatccatttttgagattgtttcc
aacgggagggcaaacaccctggaagtgctctactccaccgccaaccaccagcaggtggtg
actatcgaggacacagatttggccacgggacactggaaaaacatcacgctgttcgttcaa
gacgatcgagtgaagctttacgtgggttgtgaggaagtcaacgaggcagagatggacttt
cccatccacaaagtgctcacccaggagctggcggacgtcgctaccctcaggatcgccaag
ggagcagtgagggacaaattcacgggagtgcttcagaacgtgcgctttgtttttgggacc
tcacttgatgagatattaagaaacaaaggatgccagaacggagctgtgttaaccgatgtc
atgaccctggagaaccccgtcaacggctccagccccgccgtccagaccgatcatcctggc
cacaaagccaaagatgtccagcctggacaggtctgtggtttgtcctgtgaagacatcgca
ggcatatttaaggagctcaggggacttggtgtggttgtgagaaaactgtccattgaccta
cgcaaagtgtctgaggaaagcatgctgctgaaaaatgagacgaaacaaagtggaatctgc
atccacaacggcattgtgtaccaggacaagaatgaatggacggtggacagctgcaccgag
tgcacctgccagaactctgctacggtgtgtcgcaaaatctcctgccccctggtcccatgc
gctaacgctaccgtgcctgatggagagtgctgcccacgctgcgggagttccatggtctca
gcacagggtggctggtccccctggtctgcgtggacccagtgttccgtgacctgtggtcgg
ggcgtccagcagcgtggacgctcctgcgaccgcatcaacagcaattgcgagggcacctcg
gtccagacccgtgactgctacccccaggaatgcgacaaacgattcaaacaggacggcgcc
tggagccactggtccccctggtcatcatgctctgtgacctgtggtgagggggttatcacc
cggatacgcctctgcaactcccccacaccccagatgggtggcatggactgccagggtgaa
ggacgtcaaactgaaatctgccgcaagtcaccttgtcccatcgatggagggtggggaccg
tggtcaccatgggacacctgcactctcacttgcggcaaaggaattcagacccgcaagcgt
ctgtgctcggaccctgcccccagatttggaggaaaggattgtgttggtgaggctaagatg
tctcaggtgtgcaacaaacaagactgtcctattgatggctgtctgtccaacccttgcttc
cctggtgcaatgtgcaccagtttcccagacggctccttccgttgtggcaagtgtccactt
ggctacaccggagacggcctcacttgcaaggacatcgatgagtgcaaagaggttcccgat
gcctgctacgttcataatggagtccatctgtgtgagaacacagaaccaggttacaactgt
ctgccctgccctgcacgcttctctggccctcagccctttgggaggggagtagagcaggca
actgccaaaaaacaggtttgtgagccccgcaatccctgtcgggatggcagccacgactgc
cacaaaaatgcaaactgcatttacctcggcgtctacagcgagtccatgttccgctgtgag
tgcaaacctgggtacgctggaaatggtcacatctgtggagaggacagcgacctggacgga
tggcccaaccacaacttggtgtgtgtggagaacgccacctaccactgcagcaaggacaac
tgccccagtcttcctaattccggccaggaggatcatgacaaagatggcctgggtgatgaa
tgcgacacggatgatgacaatgacaggattccagatgatagggacaactgtccaagactg
tacaaccctgcgcagtatgacgcagacagagatgatgttggtgatctctgtgacaactgt
gttttcgaggctaacactgaccaaactgacaccgacagtaatggagagggtgacgcctgt
gctgttgacattgacggtgatggtatcctgaacgaggacgacaactgcccgtatgtttat
aacgtggatcagagagacactgacagggacggcgtgggtgaccactgtgacaactgccct
ctggaacacaaccctgatcagattgattcagactcagatcgtgtgggagacaagtgtgac
aacaaccaagacattgatgaggacggtcaccagaacaacttggacaactgcccctatata
cccaacgccaaccaggctgaccatgacaaggatggaaagggtgatgcctgtgaccatgac
gacgacaacgatggcattcctgatgacaaagacaactgtcggctggcttttaaccctgat
cagacagattctgatggcgatggccgtggtgatatctgcaaagatgactttgatcaagac
agtgttttggacatttatgacgtgtgccctgagaattttgccatcagtgaaacagatttc
cgcagattccaaatggtgcctttagacccaacaggcacctcacagatcgaccccaactgg
gtggtgcgacatcagggcaaggagttggtccagactgtcaactgtgatcctggcatcgct
gttggttatgatgagttcagcgcagtggatttcagcgggaccttctttatcaacacggac
agagacgatgactacgctggctttgtgttcggttaccagtcaagctcacgcttctacacg
gtgatgtggaaacagatcacacagacgtactggtctaccacacccacgagagctcaaggt
tactctggcctgtcaatcaaagttgtcaattccaccactggtcccggtgagcacttgagg
aatgccctgtggcacacgggagacaccgcaggacaggtgcgtactctgtggcatgacccc
aagaaaattggctggaaggacttcacagcctacagatggcatctgacccacagacccaaa
actggacttattagagtggtcatgtacgaaggcaaaagaataatggctgattctggaaac
atctacgacaagacatacgctggtgggcgactaggcctgtacgtgttctctcaggagatg
gtttacttctctgatctgaagtatgaatgcaga
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integrated database retrieval system
